Hb_007382_070

Information

Type -
Description -
Location Contig7382: 42401-44171
Sequence    

Annotation

kegg
ID tcc:TCM_008528
description Pollen Ole e 1 allergen and extensin family protein, putative
nr
ID XP_012085742.1
description PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A061E5X1
description Pollen Ole e 1 allergen and extensin family protein, putative OS=Theobroma cacao GN=TCM_008528 PE=4 SV=1
Gene Ontology
ID GO:0016787
description pollen ole e 1 allergen and extensin family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56256: 42764-43789
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007382_070 0.0 - - PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Jatropha curcas]
2 Hb_006970_100 0.0937856516 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_000465_180 0.1113440614 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
4 Hb_029576_080 0.1137211666 - - Aspartic proteinase precursor, putative [Ricinus communis]
5 Hb_002928_220 0.1189193723 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
6 Hb_000149_120 0.1201777318 - - PREDICTED: uncharacterized protein LOC105642119 isoform X2 [Jatropha curcas]
7 Hb_006651_010 0.1223256124 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]
8 Hb_001519_240 0.1242842026 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
9 Hb_135554_010 0.1257673469 - - Insulin-degrading enzyme, putative [Ricinus communis]
10 Hb_000661_230 0.1380070522 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X2 [Jatropha curcas]
11 Hb_009812_010 0.1403813363 - - ABC transporter family protein [Hevea brasiliensis]
12 Hb_005618_110 0.1472791153 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_010839_010 0.149254419 - - receptor-kinase, putative [Ricinus communis]
14 Hb_033622_020 0.1528628588 - - lipid binding protein, putative [Ricinus communis]
15 Hb_000457_130 0.1561381629 - - hypothetical protein AALP_AA3G009100 [Arabis alpina]
16 Hb_000254_150 0.1564627804 - - PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
17 Hb_003060_080 0.1568570406 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
18 Hb_001660_050 0.1588310221 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Eucalyptus grandis]
19 Hb_040963_010 0.1616040921 - - PREDICTED: polyneuridine-aldehyde esterase-like [Populus euphratica]
20 Hb_170878_050 0.164602853 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]

Gene co-expression network

sample Hb_007382_070 Hb_007382_070 Hb_006970_100 Hb_006970_100 Hb_007382_070--Hb_006970_100 Hb_000465_180 Hb_000465_180 Hb_007382_070--Hb_000465_180 Hb_029576_080 Hb_029576_080 Hb_007382_070--Hb_029576_080 Hb_002928_220 Hb_002928_220 Hb_007382_070--Hb_002928_220 Hb_000149_120 Hb_000149_120 Hb_007382_070--Hb_000149_120 Hb_006651_010 Hb_006651_010 Hb_007382_070--Hb_006651_010 Hb_006970_100--Hb_006651_010 Hb_006970_100--Hb_002928_220 Hb_003060_080 Hb_003060_080 Hb_006970_100--Hb_003060_080 Hb_033622_020 Hb_033622_020 Hb_006970_100--Hb_033622_020 Hb_006569_110 Hb_006569_110 Hb_006970_100--Hb_006569_110 Hb_000137_060 Hb_000137_060 Hb_000465_180--Hb_000137_060 Hb_000457_130 Hb_000457_130 Hb_000465_180--Hb_000457_130 Hb_135554_010 Hb_135554_010 Hb_000465_180--Hb_135554_010 Hb_001519_240 Hb_001519_240 Hb_000465_180--Hb_001519_240 Hb_001288_050 Hb_001288_050 Hb_000465_180--Hb_001288_050 Hb_001660_050 Hb_001660_050 Hb_029576_080--Hb_001660_050 Hb_010839_010 Hb_010839_010 Hb_029576_080--Hb_010839_010 Hb_000917_120 Hb_000917_120 Hb_029576_080--Hb_000917_120 Hb_009659_040 Hb_009659_040 Hb_029576_080--Hb_009659_040 Hb_000011_120 Hb_000011_120 Hb_029576_080--Hb_000011_120 Hb_170878_050 Hb_170878_050 Hb_029576_080--Hb_170878_050 Hb_002928_220--Hb_000149_120 Hb_002928_220--Hb_006569_110 Hb_009486_100 Hb_009486_100 Hb_002928_220--Hb_009486_100 Hb_002542_090 Hb_002542_090 Hb_002928_220--Hb_002542_090 Hb_006938_010 Hb_006938_010 Hb_002928_220--Hb_006938_010 Hb_006120_020 Hb_006120_020 Hb_000149_120--Hb_006120_020 Hb_040963_010 Hb_040963_010 Hb_000149_120--Hb_040963_010 Hb_024570_020 Hb_024570_020 Hb_000149_120--Hb_024570_020 Hb_000149_120--Hb_006970_100 Hb_006651_010--Hb_003060_080 Hb_006651_010--Hb_033622_020 Hb_006651_010--Hb_135554_010 Hb_006651_010--Hb_001519_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.164111 31.4993 21.4471 8.94397 0.186175 0.0610155
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 108.476 60.7767

CAGE analysis