Hb_033622_020

Information

Type -
Description -
Location Contig33622: 12495-13407
Sequence    

Annotation

kegg
ID rcu:RCOM_0646560
description lipid binding protein, putative
nr
ID XP_002524759.1
description lipid binding protein, putative [Ricinus communis]
swissprot
ID Q9ZQI8
description Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1
trembl
ID B9SFJ0
description Lipid binding protein, putative OS=Ricinus communis GN=RCOM_0646560 PE=4 SV=1
Gene Ontology
ID GO:0008289
description non-specific lipid-transfer protein at2g13820

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033622_020 0.0 - - lipid binding protein, putative [Ricinus communis]
2 Hb_001597_110 0.0840031929 - - -
3 Hb_000380_130 0.084264604 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
4 Hb_135554_010 0.0923860021 - - Insulin-degrading enzyme, putative [Ricinus communis]
5 Hb_074892_010 0.1046742378 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
6 Hb_006970_100 0.1068361397 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_006651_010 0.1115787221 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]
8 Hb_001218_070 0.1138543704 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
9 Hb_001519_240 0.1256348712 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
10 Hb_009812_010 0.1330808021 - - ABC transporter family protein [Hevea brasiliensis]
11 Hb_000661_230 0.1372683995 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X2 [Jatropha curcas]
12 Hb_046770_010 0.1403067661 - - conserved hypothetical protein [Ricinus communis]
13 Hb_031931_030 0.1468521304 - - lipid binding protein, putative [Ricinus communis]
14 Hb_000422_020 0.1478274988 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
15 Hb_056101_010 0.1480311806 - - hypothetical protein POPTR_0391s00200g [Populus trichocarpa]
16 Hb_000457_130 0.1505137409 - - hypothetical protein AALP_AA3G009100 [Arabis alpina]
17 Hb_001900_130 0.1506742834 - - PREDICTED: uncharacterized protein LOC105632667 [Jatropha curcas]
18 Hb_011671_420 0.1517648982 - - hypothetical protein POPTR_0015s12340g [Populus trichocarpa]
19 Hb_007382_070 0.1528628588 - - PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Jatropha curcas]
20 Hb_000465_180 0.1532479654 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_033622_020 Hb_033622_020 Hb_001597_110 Hb_001597_110 Hb_033622_020--Hb_001597_110 Hb_000380_130 Hb_000380_130 Hb_033622_020--Hb_000380_130 Hb_135554_010 Hb_135554_010 Hb_033622_020--Hb_135554_010 Hb_074892_010 Hb_074892_010 Hb_033622_020--Hb_074892_010 Hb_006970_100 Hb_006970_100 Hb_033622_020--Hb_006970_100 Hb_006651_010 Hb_006651_010 Hb_033622_020--Hb_006651_010 Hb_001597_110--Hb_074892_010 Hb_001597_110--Hb_000380_130 Hb_006573_250 Hb_006573_250 Hb_001597_110--Hb_006573_250 Hb_001218_070 Hb_001218_070 Hb_001597_110--Hb_001218_070 Hb_000457_130 Hb_000457_130 Hb_001597_110--Hb_000457_130 Hb_000380_130--Hb_074892_010 Hb_000380_130--Hb_001218_070 Hb_046770_010 Hb_046770_010 Hb_000380_130--Hb_046770_010 Hb_011671_420 Hb_011671_420 Hb_000380_130--Hb_011671_420 Hb_001519_240 Hb_001519_240 Hb_135554_010--Hb_001519_240 Hb_029576_080 Hb_029576_080 Hb_135554_010--Hb_029576_080 Hb_000465_180 Hb_000465_180 Hb_135554_010--Hb_000465_180 Hb_010839_010 Hb_010839_010 Hb_135554_010--Hb_010839_010 Hb_135554_010--Hb_006970_100 Hb_022815_020 Hb_022815_020 Hb_074892_010--Hb_022815_020 Hb_074892_010--Hb_001218_070 Hb_032631_080 Hb_032631_080 Hb_074892_010--Hb_032631_080 Hb_006970_100--Hb_006651_010 Hb_007382_070 Hb_007382_070 Hb_006970_100--Hb_007382_070 Hb_002928_220 Hb_002928_220 Hb_006970_100--Hb_002928_220 Hb_003060_080 Hb_003060_080 Hb_006970_100--Hb_003060_080 Hb_006569_110 Hb_006569_110 Hb_006970_100--Hb_006569_110 Hb_006651_010--Hb_003060_080 Hb_006651_010--Hb_007382_070 Hb_006651_010--Hb_135554_010 Hb_006651_010--Hb_001519_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0489287 0.0387413 0.0546908 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.430445 0.166843

CAGE analysis