Hb_000465_180

Information

Type -
Description -
Location Contig465: 124340-128051
Sequence    

Annotation

kegg
ID egr:104445957
description uncharacterized LOC104445957
nr
ID XP_012070035.1
description PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L719
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03435 PE=4 SV=1
Gene Ontology
ID GO:0008270
description cysteine histidine-rich c1 domain family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43976: 124788-125191 , PASA_asmbl_43978: 126389-126696 , PASA_asmbl_43979: 126869-127566
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000465_180 0.0 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
2 Hb_000137_060 0.1020058701 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
3 Hb_000457_130 0.1092650615 - - hypothetical protein AALP_AA3G009100 [Arabis alpina]
4 Hb_007382_070 0.1113440614 - - PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Jatropha curcas]
5 Hb_135554_010 0.114509298 - - Insulin-degrading enzyme, putative [Ricinus communis]
6 Hb_001519_240 0.1248314681 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
7 Hb_001288_050 0.1346833452 - - -
8 Hb_001571_020 0.1422223882 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Citrus sinensis]
9 Hb_000567_150 0.1472710712 - - cysteine protease, putative [Ricinus communis]
10 Hb_000751_070 0.1518100431 - - -
11 Hb_033622_020 0.1532479654 - - lipid binding protein, putative [Ricinus communis]
12 Hb_001597_110 0.1567982053 - - -
13 Hb_029576_080 0.1570899659 - - Aspartic proteinase precursor, putative [Ricinus communis]
14 Hb_000661_230 0.1615885218 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X2 [Jatropha curcas]
15 Hb_009812_010 0.1619221555 - - ABC transporter family protein [Hevea brasiliensis]
16 Hb_002379_060 0.1636118746 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
17 Hb_001300_140 0.1657383088 - - -
18 Hb_001660_050 0.1681395949 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Eucalyptus grandis]
19 Hb_006970_100 0.1682660563 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_011576_010 0.1710044035 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]

Gene co-expression network

sample Hb_000465_180 Hb_000465_180 Hb_000137_060 Hb_000137_060 Hb_000465_180--Hb_000137_060 Hb_000457_130 Hb_000457_130 Hb_000465_180--Hb_000457_130 Hb_007382_070 Hb_007382_070 Hb_000465_180--Hb_007382_070 Hb_135554_010 Hb_135554_010 Hb_000465_180--Hb_135554_010 Hb_001519_240 Hb_001519_240 Hb_000465_180--Hb_001519_240 Hb_001288_050 Hb_001288_050 Hb_000465_180--Hb_001288_050 Hb_000137_060--Hb_001288_050 Hb_000567_150 Hb_000567_150 Hb_000137_060--Hb_000567_150 Hb_001571_020 Hb_001571_020 Hb_000137_060--Hb_001571_020 Hb_001005_040 Hb_001005_040 Hb_000137_060--Hb_001005_040 Hb_007130_010 Hb_007130_010 Hb_000137_060--Hb_007130_010 Hb_001597_110 Hb_001597_110 Hb_000457_130--Hb_001597_110 Hb_001300_140 Hb_001300_140 Hb_000457_130--Hb_001300_140 Hb_009812_010 Hb_009812_010 Hb_000457_130--Hb_009812_010 Hb_000844_090 Hb_000844_090 Hb_000457_130--Hb_000844_090 Hb_011576_010 Hb_011576_010 Hb_000457_130--Hb_011576_010 Hb_006970_100 Hb_006970_100 Hb_007382_070--Hb_006970_100 Hb_029576_080 Hb_029576_080 Hb_007382_070--Hb_029576_080 Hb_002928_220 Hb_002928_220 Hb_007382_070--Hb_002928_220 Hb_000149_120 Hb_000149_120 Hb_007382_070--Hb_000149_120 Hb_006651_010 Hb_006651_010 Hb_007382_070--Hb_006651_010 Hb_135554_010--Hb_001519_240 Hb_033622_020 Hb_033622_020 Hb_135554_010--Hb_033622_020 Hb_135554_010--Hb_029576_080 Hb_010839_010 Hb_010839_010 Hb_135554_010--Hb_010839_010 Hb_135554_010--Hb_006970_100 Hb_001519_240--Hb_007382_070 Hb_001519_240--Hb_033622_020 Hb_001519_240--Hb_006970_100 Hb_001519_240--Hb_006651_010 Hb_001288_050--Hb_000567_150 Hb_001288_050--Hb_001005_040 Hb_000751_070 Hb_000751_070 Hb_001288_050--Hb_000751_070 Hb_001597_090 Hb_001597_090 Hb_001288_050--Hb_001597_090 Hb_001288_050--Hb_001571_020 Hb_002016_130 Hb_002016_130 Hb_001288_050--Hb_002016_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0469517 0.742727 1.06739 0.622691 0.0154171 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.30222 3.08508

CAGE analysis