Hb_011576_010

Information

Type -
Description -
Location Contig11576: 13536-16417
Sequence    

Annotation

kegg
ID rcu:RCOM_0834660
description hydrolase, hydrolyzing O-glycosyl compounds, putative (EC:3.2.1.8)
nr
ID XP_002532419.1
description hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T2F0
description Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_0834660 PE=4 SV=1
Gene Ontology
ID GO:0004553
description hydrolyzing o-glycosyl

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04738: 13485-16447
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011576_010 0.0 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
2 Hb_000230_020 0.09642726 - - cysteine synthase, putative [Ricinus communis]
3 Hb_001949_010 0.0999506105 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
4 Hb_003095_110 0.1339127197 - - GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
5 Hb_000457_130 0.1382719105 - - hypothetical protein AALP_AA3G009100 [Arabis alpina]
6 Hb_000751_070 0.1493405287 - - -
7 Hb_001597_110 0.1500579381 - - -
8 Hb_001004_130 0.1501951916 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
9 Hb_004218_310 0.1511879925 - - PREDICTED: NADPH:quinone oxidoreductase-like [Camelina sativa]
10 Hb_079394_010 0.1541845217 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
11 Hb_146930_010 0.1558639498 - - -
12 Hb_006573_250 0.1581251381 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
13 Hb_008376_020 0.1587829695 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
14 Hb_000567_150 0.1589141035 - - cysteine protease, putative [Ricinus communis]
15 Hb_000847_120 0.1638759536 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
16 Hb_000844_090 0.1642241252 - - PREDICTED: cytochrome P450 82C4-like [Jatropha curcas]
17 Hb_000751_050 0.1647329341 - - PREDICTED: extensin, partial [Solanum lycopersicum]
18 Hb_032223_020 0.1663668927 - - ATP binding protein, putative [Ricinus communis]
19 Hb_000087_120 0.1669051521 - - AMP dependent CoA ligase, putative [Ricinus communis]
20 Hb_178703_010 0.1682394984 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]

Gene co-expression network

sample Hb_011576_010 Hb_011576_010 Hb_000230_020 Hb_000230_020 Hb_011576_010--Hb_000230_020 Hb_001949_010 Hb_001949_010 Hb_011576_010--Hb_001949_010 Hb_003095_110 Hb_003095_110 Hb_011576_010--Hb_003095_110 Hb_000457_130 Hb_000457_130 Hb_011576_010--Hb_000457_130 Hb_000751_070 Hb_000751_070 Hb_011576_010--Hb_000751_070 Hb_001597_110 Hb_001597_110 Hb_011576_010--Hb_001597_110 Hb_000230_020--Hb_001949_010 Hb_026419_010 Hb_026419_010 Hb_000230_020--Hb_026419_010 Hb_079394_010 Hb_079394_010 Hb_000230_020--Hb_079394_010 Hb_000230_020--Hb_003095_110 Hb_000087_120 Hb_000087_120 Hb_000230_020--Hb_000087_120 Hb_005550_040 Hb_005550_040 Hb_001949_010--Hb_005550_040 Hb_178703_010 Hb_178703_010 Hb_001949_010--Hb_178703_010 Hb_032223_020 Hb_032223_020 Hb_001949_010--Hb_032223_020 Hb_000751_050 Hb_000751_050 Hb_001949_010--Hb_000751_050 Hb_000061_360 Hb_000061_360 Hb_001949_010--Hb_000061_360 Hb_004218_310 Hb_004218_310 Hb_003095_110--Hb_004218_310 Hb_000567_150 Hb_000567_150 Hb_003095_110--Hb_000567_150 Hb_003095_110--Hb_000087_120 Hb_000318_400 Hb_000318_400 Hb_003095_110--Hb_000318_400 Hb_000465_180 Hb_000465_180 Hb_000457_130--Hb_000465_180 Hb_000457_130--Hb_001597_110 Hb_001300_140 Hb_001300_140 Hb_000457_130--Hb_001300_140 Hb_009812_010 Hb_009812_010 Hb_000457_130--Hb_009812_010 Hb_000844_090 Hb_000844_090 Hb_000457_130--Hb_000844_090 Hb_000751_070--Hb_000567_150 Hb_146930_010 Hb_146930_010 Hb_000751_070--Hb_146930_010 Hb_060152_010 Hb_060152_010 Hb_000751_070--Hb_060152_010 Hb_000645_250 Hb_000645_250 Hb_000751_070--Hb_000645_250 Hb_000751_060 Hb_000751_060 Hb_000751_070--Hb_000751_060 Hb_001288_050 Hb_001288_050 Hb_000751_070--Hb_001288_050 Hb_074892_010 Hb_074892_010 Hb_001597_110--Hb_074892_010 Hb_033622_020 Hb_033622_020 Hb_001597_110--Hb_033622_020 Hb_000380_130 Hb_000380_130 Hb_001597_110--Hb_000380_130 Hb_006573_250 Hb_006573_250 Hb_001597_110--Hb_006573_250 Hb_001218_070 Hb_001218_070 Hb_001597_110--Hb_001218_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0434363 0.342528 7.34012 3.32368 0.0466915 0.0232448
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0669754 0 24.5862 14.9487

CAGE analysis