Hb_178703_010

Information

Type -
Description -
Location Contig178703: 1-437
Sequence    

Annotation

kegg
ID rcu:RCOM_0834660
description hydrolase, hydrolyzing O-glycosyl compounds, putative (EC:3.2.1.8)
nr
ID XP_002532419.1
description hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T2F0
description Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_0834660 PE=4 SV=1
Gene Ontology
ID GO:0031176
description hydrolyzing o-glycosyl

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_178703_010 0.0 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
2 Hb_032223_020 0.0475596739 - - ATP binding protein, putative [Ricinus communis]
3 Hb_005550_040 0.0866859256 - - PREDICTED: epoxide hydrolase 4-like [Jatropha curcas]
4 Hb_006573_250 0.0901600339 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
5 Hb_003189_020 0.0943323015 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
6 Hb_001949_010 0.1039859908 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
7 Hb_000751_050 0.1305871532 - - PREDICTED: extensin, partial [Solanum lycopersicum]
8 Hb_000061_360 0.1358744968 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
9 Hb_004881_080 0.1394150963 - - PREDICTED: glycerol-3-phosphate acyltransferase 1 [Populus euphratica]
10 Hb_000645_250 0.1422639616 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
11 Hb_146930_010 0.1432215292 - - -
12 Hb_008376_020 0.1438112562 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
13 Hb_105134_010 0.1485259829 - - hypothetical protein JCGZ_16347 [Jatropha curcas]
14 Hb_046770_010 0.1492441309 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001004_130 0.1522056603 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
16 Hb_001597_110 0.1551320624 - - -
17 Hb_156499_010 0.1614558168 - - hypothetical protein JCGZ_21064 [Jatropha curcas]
18 Hb_000609_020 0.1673499352 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
19 Hb_011576_010 0.1682394984 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
20 Hb_000751_060 0.169532168 - - PREDICTED: extensin-2-like, partial [Sesamum indicum]

Gene co-expression network

sample Hb_178703_010 Hb_178703_010 Hb_032223_020 Hb_032223_020 Hb_178703_010--Hb_032223_020 Hb_005550_040 Hb_005550_040 Hb_178703_010--Hb_005550_040 Hb_006573_250 Hb_006573_250 Hb_178703_010--Hb_006573_250 Hb_003189_020 Hb_003189_020 Hb_178703_010--Hb_003189_020 Hb_001949_010 Hb_001949_010 Hb_178703_010--Hb_001949_010 Hb_000751_050 Hb_000751_050 Hb_178703_010--Hb_000751_050 Hb_032223_020--Hb_006573_250 Hb_008376_020 Hb_008376_020 Hb_032223_020--Hb_008376_020 Hb_000645_250 Hb_000645_250 Hb_032223_020--Hb_000645_250 Hb_032223_020--Hb_001949_010 Hb_032223_020--Hb_005550_040 Hb_005550_040--Hb_003189_020 Hb_000061_360 Hb_000061_360 Hb_005550_040--Hb_000061_360 Hb_005550_040--Hb_001949_010 Hb_046770_010 Hb_046770_010 Hb_005550_040--Hb_046770_010 Hb_105134_010 Hb_105134_010 Hb_005550_040--Hb_105134_010 Hb_001004_130 Hb_001004_130 Hb_006573_250--Hb_001004_130 Hb_001597_110 Hb_001597_110 Hb_006573_250--Hb_001597_110 Hb_006573_250--Hb_008376_020 Hb_032631_080 Hb_032631_080 Hb_006573_250--Hb_032631_080 Hb_003189_020--Hb_105134_010 Hb_003189_020--Hb_046770_010 Hb_003189_020--Hb_000061_360 Hb_004881_080 Hb_004881_080 Hb_003189_020--Hb_004881_080 Hb_011576_010 Hb_011576_010 Hb_001949_010--Hb_011576_010 Hb_001949_010--Hb_000751_050 Hb_001949_010--Hb_000061_360 Hb_146930_010 Hb_146930_010 Hb_000751_050--Hb_146930_010 Hb_001597_090 Hb_001597_090 Hb_000751_050--Hb_001597_090 Hb_000751_050--Hb_005550_040 Hb_078081_020 Hb_078081_020 Hb_000751_050--Hb_078081_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 6.495 9.76561 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 39.2398 13.7892

CAGE analysis