Hb_005550_040

Information

Type -
Description -
Location Contig5550: 36198-52515
Sequence    

Annotation

kegg
ID pop:POPTR_0004s16310g
description POPTRDRAFT_195465; hypothetical protein
nr
ID XP_012070157.1
description PREDICTED: epoxide hydrolase 4-like [Jatropha curcas]
swissprot
ID Q8IUS5
description Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2
trembl
ID A0A067LN71
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10100 PE=4 SV=1
Gene Ontology
ID GO:0003824
description epoxide hydrolase 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48486: 36834-37245
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005550_040 0.0 - - PREDICTED: epoxide hydrolase 4-like [Jatropha curcas]
2 Hb_003189_020 0.0608072579 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
3 Hb_178703_010 0.0866859256 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
4 Hb_000061_360 0.0867687204 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
5 Hb_001949_010 0.0956053468 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
6 Hb_046770_010 0.1006889169 - - conserved hypothetical protein [Ricinus communis]
7 Hb_105134_010 0.1017631336 - - hypothetical protein JCGZ_16347 [Jatropha curcas]
8 Hb_000751_050 0.1198866825 - - PREDICTED: extensin, partial [Solanum lycopersicum]
9 Hb_094439_030 0.1218968934 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38780 [Eucalyptus grandis]
10 Hb_006573_250 0.1223579981 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
11 Hb_004881_080 0.127072117 - - PREDICTED: glycerol-3-phosphate acyltransferase 1 [Populus euphratica]
12 Hb_026284_010 0.1304337797 - - -
13 Hb_032223_020 0.1318097248 - - ATP binding protein, putative [Ricinus communis]
14 Hb_000567_300 0.1326419651 - - PREDICTED: protein YLS9-like [Jatropha curcas]
15 Hb_001597_110 0.1410015577 - - -
16 Hb_109673_010 0.1514285401 - - glutathione s-transferase, putative [Ricinus communis]
17 Hb_146930_010 0.1542760093 - - -
18 Hb_000380_130 0.1565551185 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
19 Hb_001218_070 0.1632239071 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
20 Hb_074892_010 0.1642163817 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005550_040 Hb_005550_040 Hb_003189_020 Hb_003189_020 Hb_005550_040--Hb_003189_020 Hb_178703_010 Hb_178703_010 Hb_005550_040--Hb_178703_010 Hb_000061_360 Hb_000061_360 Hb_005550_040--Hb_000061_360 Hb_001949_010 Hb_001949_010 Hb_005550_040--Hb_001949_010 Hb_046770_010 Hb_046770_010 Hb_005550_040--Hb_046770_010 Hb_105134_010 Hb_105134_010 Hb_005550_040--Hb_105134_010 Hb_003189_020--Hb_105134_010 Hb_003189_020--Hb_178703_010 Hb_003189_020--Hb_046770_010 Hb_003189_020--Hb_000061_360 Hb_004881_080 Hb_004881_080 Hb_003189_020--Hb_004881_080 Hb_032223_020 Hb_032223_020 Hb_178703_010--Hb_032223_020 Hb_006573_250 Hb_006573_250 Hb_178703_010--Hb_006573_250 Hb_178703_010--Hb_001949_010 Hb_000751_050 Hb_000751_050 Hb_178703_010--Hb_000751_050 Hb_000567_300 Hb_000567_300 Hb_000061_360--Hb_000567_300 Hb_000061_360--Hb_004881_080 Hb_000061_360--Hb_001949_010 Hb_002218_040 Hb_002218_040 Hb_000061_360--Hb_002218_040 Hb_011576_010 Hb_011576_010 Hb_001949_010--Hb_011576_010 Hb_001949_010--Hb_032223_020 Hb_001949_010--Hb_000751_050 Hb_001218_070 Hb_001218_070 Hb_046770_010--Hb_001218_070 Hb_109673_010 Hb_109673_010 Hb_046770_010--Hb_109673_010 Hb_000380_130 Hb_000380_130 Hb_046770_010--Hb_000380_130 Hb_046770_010--Hb_105134_010 Hb_094439_030 Hb_094439_030 Hb_105134_010--Hb_094439_030 Hb_156499_010 Hb_156499_010 Hb_105134_010--Hb_156499_010 Hb_026284_010 Hb_026284_010 Hb_105134_010--Hb_026284_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0413927 0.0601425 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.417975 0.134781

CAGE analysis