Hb_109673_010

Information

Type -
Description -
Location Contig109673: 1787-3124
Sequence    

Annotation

kegg
ID rcu:RCOM_0496860
description glutathione s-transferase, putative (EC:4.4.1.5)
nr
ID XP_002527848.1
description glutathione s-transferase, putative [Ricinus communis]
swissprot
ID P32110
description Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1
trembl
ID B9SPC9
description Glutathione s-transferase, putative OS=Ricinus communis GN=RCOM_0496860 PE=3 SV=1
Gene Ontology
ID GO:0016829
description probable glutathione s-transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_109673_010 0.0 - - glutathione s-transferase, putative [Ricinus communis]
2 Hb_001218_070 0.0807580812 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
3 Hb_046770_010 0.0920473194 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001545_270 0.1002640485 - - laccase, putative [Ricinus communis]
5 Hb_033363_080 0.1028883174 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
6 Hb_004316_130 0.1095973072 - - PREDICTED: glutathione transferase GST 23-like, partial [Eucalyptus grandis]
7 Hb_032631_080 0.1121069127 - - PREDICTED: L-Ala-D/L-amino acid epimerase-like isoform X2 [Jatropha curcas]
8 Hb_001922_010 0.1154281636 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
9 Hb_003189_020 0.11659628 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
10 Hb_011145_020 0.121898642 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
11 Hb_000380_130 0.1294814046 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
12 Hb_000911_050 0.1312518965 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 21 [Jatropha curcas]
13 Hb_000659_010 0.1323354965 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
14 Hb_006573_250 0.1339789962 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
15 Hb_000797_030 0.1352577433 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
16 Hb_004881_080 0.1360084058 - - PREDICTED: glycerol-3-phosphate acyltransferase 1 [Populus euphratica]
17 Hb_011671_420 0.1383550722 - - hypothetical protein POPTR_0015s12340g [Populus trichocarpa]
18 Hb_175968_010 0.1409408807 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
19 Hb_003097_200 0.14182932 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003893_100 0.145718293 - - PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]

Gene co-expression network

sample Hb_109673_010 Hb_109673_010 Hb_001218_070 Hb_001218_070 Hb_109673_010--Hb_001218_070 Hb_046770_010 Hb_046770_010 Hb_109673_010--Hb_046770_010 Hb_001545_270 Hb_001545_270 Hb_109673_010--Hb_001545_270 Hb_033363_080 Hb_033363_080 Hb_109673_010--Hb_033363_080 Hb_004316_130 Hb_004316_130 Hb_109673_010--Hb_004316_130 Hb_032631_080 Hb_032631_080 Hb_109673_010--Hb_032631_080 Hb_001218_070--Hb_046770_010 Hb_000380_130 Hb_000380_130 Hb_001218_070--Hb_000380_130 Hb_001218_070--Hb_001545_270 Hb_011671_420 Hb_011671_420 Hb_001218_070--Hb_011671_420 Hb_033622_020 Hb_033622_020 Hb_001218_070--Hb_033622_020 Hb_046770_010--Hb_000380_130 Hb_003189_020 Hb_003189_020 Hb_046770_010--Hb_003189_020 Hb_005550_040 Hb_005550_040 Hb_046770_010--Hb_005550_040 Hb_105134_010 Hb_105134_010 Hb_046770_010--Hb_105134_010 Hb_001922_010 Hb_001922_010 Hb_001545_270--Hb_001922_010 Hb_000911_050 Hb_000911_050 Hb_001545_270--Hb_000911_050 Hb_000723_240 Hb_000723_240 Hb_001545_270--Hb_000723_240 Hb_008418_010 Hb_008418_010 Hb_001545_270--Hb_008418_010 Hb_004774_060 Hb_004774_060 Hb_033363_080--Hb_004774_060 Hb_011145_020 Hb_011145_020 Hb_033363_080--Hb_011145_020 Hb_175968_010 Hb_175968_010 Hb_033363_080--Hb_175968_010 Hb_000438_190 Hb_000438_190 Hb_033363_080--Hb_000438_190 Hb_012796_050 Hb_012796_050 Hb_033363_080--Hb_012796_050 Hb_004055_180 Hb_004055_180 Hb_033363_080--Hb_004055_180 Hb_003893_100 Hb_003893_100 Hb_004316_130--Hb_003893_100 Hb_000297_180 Hb_000297_180 Hb_004316_130--Hb_000297_180 Hb_144783_010 Hb_144783_010 Hb_004316_130--Hb_144783_010 Hb_000797_030 Hb_000797_030 Hb_004316_130--Hb_000797_030 Hb_003097_200 Hb_003097_200 Hb_004316_130--Hb_003097_200 Hb_002475_070 Hb_002475_070 Hb_004316_130--Hb_002475_070 Hb_001005_210 Hb_001005_210 Hb_032631_080--Hb_001005_210 Hb_000075_030 Hb_000075_030 Hb_032631_080--Hb_000075_030 Hb_032631_080--Hb_001922_010 Hb_001691_060 Hb_001691_060 Hb_032631_080--Hb_001691_060 Hb_004881_080 Hb_004881_080 Hb_032631_080--Hb_004881_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.7129 7.61509 14.8563 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 97.7571 14.9385

CAGE analysis