Hb_000911_050

Information

Type -
Description -
Location Contig911: 57747-61178
Sequence    

Annotation

kegg
ID rcu:RCOM_0078150
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_012065288.1
description PREDICTED: CBL-interacting serine/threonine-protein kinase 21 [Jatropha curcas]
swissprot
ID Q94CG0
description CBL-interacting serine/threonine-protein kinase 21 OS=Arabidopsis thaliana GN=CIPK21 PE=1 SV=1
trembl
ID A0A067L5Y2
description Non-specific serine/threonine protein kinase OS=Jatropha curcas GN=JCGZ_23015 PE=4 SV=1
Gene Ontology
ID GO:0000166
description cbl-interacting serine threonine-protein kinase 21

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62124: 57887-58207 , PASA_asmbl_62125: 59920-60208
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000911_050 0.0 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 21 [Jatropha curcas]
2 Hb_000797_030 0.0831135715 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
3 Hb_036069_020 0.0911396832 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
4 Hb_003097_200 0.0938761097 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001377_010 0.0989195895 - - PREDICTED: transcription factor TRY-like [Jatropha curcas]
6 Hb_001545_270 0.1069521636 - - laccase, putative [Ricinus communis]
7 Hb_006637_040 0.1119241216 - - phenylalanine ammonia-lyase 2 [Manihot esculenta]
8 Hb_159015_010 0.1184854038 - - receptor protein kinase, putative [Ricinus communis]
9 Hb_001758_120 0.1196403879 - - unnamed protein product [Vitis vinifera]
10 Hb_001136_030 0.1203234709 - - PREDICTED: mediator of RNA polymerase II transcription subunit 25-like [Jatropha curcas]
11 Hb_001218_070 0.1204733782 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
12 Hb_003893_100 0.1212053104 - - PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]
13 Hb_002870_010 0.1221823259 - - PREDICTED: uncharacterized protein LOC105649339 [Jatropha curcas]
14 Hb_164283_010 0.1230824473 - - hypothetical protein RCOM_0725500 [Ricinus communis]
15 Hb_000207_340 0.1231383893 transcription factor TF Family: GRAS hypothetical protein POPTR_0013s11930g [Populus trichocarpa]
16 Hb_130563_010 0.1231577052 - - PREDICTED: ABC transporter C family member 3-like isoform X1 [Jatropha curcas]
17 Hb_109673_010 0.1312518965 - - glutathione s-transferase, putative [Ricinus communis]
18 Hb_001104_210 0.1312991265 - - hypothetical protein JCGZ_23620 [Jatropha curcas]
19 Hb_000393_030 0.134146574 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_000934_170 0.1351215332 - - alcohol dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000911_050 Hb_000911_050 Hb_000797_030 Hb_000797_030 Hb_000911_050--Hb_000797_030 Hb_036069_020 Hb_036069_020 Hb_000911_050--Hb_036069_020 Hb_003097_200 Hb_003097_200 Hb_000911_050--Hb_003097_200 Hb_001377_010 Hb_001377_010 Hb_000911_050--Hb_001377_010 Hb_001545_270 Hb_001545_270 Hb_000911_050--Hb_001545_270 Hb_006637_040 Hb_006637_040 Hb_000911_050--Hb_006637_040 Hb_000797_030--Hb_003097_200 Hb_003893_100 Hb_003893_100 Hb_000797_030--Hb_003893_100 Hb_000797_030--Hb_006637_040 Hb_004316_130 Hb_004316_130 Hb_000797_030--Hb_004316_130 Hb_001758_120 Hb_001758_120 Hb_000797_030--Hb_001758_120 Hb_130563_010 Hb_130563_010 Hb_036069_020--Hb_130563_010 Hb_036069_020--Hb_001758_120 Hb_036069_020--Hb_001377_010 Hb_000207_340 Hb_000207_340 Hb_036069_020--Hb_000207_340 Hb_036069_020--Hb_000797_030 Hb_003097_200--Hb_003893_100 Hb_003097_200--Hb_006637_040 Hb_003097_200--Hb_004316_130 Hb_003097_200--Hb_001758_120 Hb_001136_030 Hb_001136_030 Hb_001377_010--Hb_001136_030 Hb_002870_010 Hb_002870_010 Hb_001377_010--Hb_002870_010 Hb_001104_210 Hb_001104_210 Hb_001377_010--Hb_001104_210 Hb_001514_070 Hb_001514_070 Hb_001377_010--Hb_001514_070 Hb_003090_180 Hb_003090_180 Hb_001377_010--Hb_003090_180 Hb_001922_010 Hb_001922_010 Hb_001545_270--Hb_001922_010 Hb_109673_010 Hb_109673_010 Hb_001545_270--Hb_109673_010 Hb_001218_070 Hb_001218_070 Hb_001545_270--Hb_001218_070 Hb_000723_240 Hb_000723_240 Hb_001545_270--Hb_000723_240 Hb_008418_010 Hb_008418_010 Hb_001545_270--Hb_008418_010 Hb_164283_010 Hb_164283_010 Hb_006637_040--Hb_164283_010 Hb_018591_010 Hb_018591_010 Hb_006637_040--Hb_018591_010 Hb_006637_040--Hb_008418_010 Hb_006637_040--Hb_001758_120 Hb_012368_080 Hb_012368_080 Hb_006637_040--Hb_012368_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0127299 1.61669 1.23124 6.53945 0 0.0252369
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0289824 0.0456039 0.0429432 22.5345 3.15665

CAGE analysis