Hb_001218_070

Information

Type -
Description -
Location Contig1218: 89528-94176
Sequence    

Annotation

kegg
ID rcu:RCOM_1035030
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012067863.1
description PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
swissprot
ID Q93Y91
description Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1
trembl
ID A0A067L2B9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15780 PE=3 SV=1
Gene Ontology
ID GO:0016021
description sugar transport protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06614: 89535-94274
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001218_070 0.0 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
2 Hb_109673_010 0.0807580812 - - glutathione s-transferase, putative [Ricinus communis]
3 Hb_046770_010 0.0888260656 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000380_130 0.0900673775 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
5 Hb_001545_270 0.1023234318 - - laccase, putative [Ricinus communis]
6 Hb_011671_420 0.1061097031 - - hypothetical protein POPTR_0015s12340g [Populus trichocarpa]
7 Hb_033622_020 0.1138543704 - - lipid binding protein, putative [Ricinus communis]
8 Hb_001597_110 0.115723362 - - -
9 Hb_000911_050 0.1204733782 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 21 [Jatropha curcas]
10 Hb_130563_010 0.122291935 - - PREDICTED: ABC transporter C family member 3-like isoform X1 [Jatropha curcas]
11 Hb_074892_010 0.1274767228 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
12 Hb_001136_030 0.1283874993 - - PREDICTED: mediator of RNA polymerase II transcription subunit 25-like [Jatropha curcas]
13 Hb_036069_020 0.1291732845 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
14 Hb_000683_010 0.1332190278 - - Interleukin-1 receptor-associated kinase, putative [Ricinus communis]
15 Hb_006573_250 0.134329766 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
16 Hb_001922_010 0.1360385074 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
17 Hb_031931_030 0.1361804799 - - lipid binding protein, putative [Ricinus communis]
18 Hb_000422_020 0.1381213492 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
19 Hb_032631_080 0.140561367 - - PREDICTED: L-Ala-D/L-amino acid epimerase-like isoform X2 [Jatropha curcas]
20 Hb_001377_010 0.1415814858 - - PREDICTED: transcription factor TRY-like [Jatropha curcas]

Gene co-expression network

sample Hb_001218_070 Hb_001218_070 Hb_109673_010 Hb_109673_010 Hb_001218_070--Hb_109673_010 Hb_046770_010 Hb_046770_010 Hb_001218_070--Hb_046770_010 Hb_000380_130 Hb_000380_130 Hb_001218_070--Hb_000380_130 Hb_001545_270 Hb_001545_270 Hb_001218_070--Hb_001545_270 Hb_011671_420 Hb_011671_420 Hb_001218_070--Hb_011671_420 Hb_033622_020 Hb_033622_020 Hb_001218_070--Hb_033622_020 Hb_109673_010--Hb_046770_010 Hb_109673_010--Hb_001545_270 Hb_033363_080 Hb_033363_080 Hb_109673_010--Hb_033363_080 Hb_004316_130 Hb_004316_130 Hb_109673_010--Hb_004316_130 Hb_032631_080 Hb_032631_080 Hb_109673_010--Hb_032631_080 Hb_046770_010--Hb_000380_130 Hb_003189_020 Hb_003189_020 Hb_046770_010--Hb_003189_020 Hb_005550_040 Hb_005550_040 Hb_046770_010--Hb_005550_040 Hb_105134_010 Hb_105134_010 Hb_046770_010--Hb_105134_010 Hb_074892_010 Hb_074892_010 Hb_000380_130--Hb_074892_010 Hb_000380_130--Hb_033622_020 Hb_001597_110 Hb_001597_110 Hb_000380_130--Hb_001597_110 Hb_000380_130--Hb_011671_420 Hb_001922_010 Hb_001922_010 Hb_001545_270--Hb_001922_010 Hb_000911_050 Hb_000911_050 Hb_001545_270--Hb_000911_050 Hb_000723_240 Hb_000723_240 Hb_001545_270--Hb_000723_240 Hb_008418_010 Hb_008418_010 Hb_001545_270--Hb_008418_010 Hb_011671_420--Hb_046770_010 Hb_008768_010 Hb_008768_010 Hb_011671_420--Hb_008768_010 Hb_011671_420--Hb_109673_010 Hb_029769_010 Hb_029769_010 Hb_011671_420--Hb_029769_010 Hb_033622_020--Hb_001597_110 Hb_135554_010 Hb_135554_010 Hb_033622_020--Hb_135554_010 Hb_033622_020--Hb_074892_010 Hb_006970_100 Hb_006970_100 Hb_033622_020--Hb_006970_100 Hb_006651_010 Hb_006651_010 Hb_033622_020--Hb_006651_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0231086 3.58223 4.04002 9.38741 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0788586 0 0 56.2855 12.533

CAGE analysis