Hb_105134_010

Information

Type -
Description -
Location Contig105134: 362-3242
Sequence    

Annotation

kegg
ID tcc:TCM_007245
description Xanthine/uracil permease family protein isoform 1
nr
ID KDP44514.1
description hypothetical protein JCGZ_16347 [Jatropha curcas]
swissprot
ID Q0WPE9
description Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2
trembl
ID A0A067LJP2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16347 PE=4 SV=1
Gene Ontology
ID GO:0016020
description nucleobase-ascorbate transporter 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_105134_010 0.0 - - hypothetical protein JCGZ_16347 [Jatropha curcas]
2 Hb_003189_020 0.0911447824 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
3 Hb_046770_010 0.1008178498 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005550_040 0.1017631336 - - PREDICTED: epoxide hydrolase 4-like [Jatropha curcas]
5 Hb_094439_030 0.1049437582 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38780 [Eucalyptus grandis]
6 Hb_156499_010 0.1152471137 - - hypothetical protein JCGZ_21064 [Jatropha curcas]
7 Hb_026284_010 0.1292006155 - - -
8 Hb_009113_010 0.14077225 - - Chalcone synthase, putative [Ricinus communis]
9 Hb_000751_050 0.1417601728 - - PREDICTED: extensin, partial [Solanum lycopersicum]
10 Hb_188681_010 0.1445052039 - - hypothetical protein POPTR_0490s00210g, partial [Populus trichocarpa]
11 Hb_178703_010 0.1485259829 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
12 Hb_078081_020 0.154952807 - - -
13 Hb_109673_010 0.1594187755 - - glutathione s-transferase, putative [Ricinus communis]
14 Hb_011671_420 0.1622651374 - - hypothetical protein POPTR_0015s12340g [Populus trichocarpa]
15 Hb_000330_120 0.1638303171 - - PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Nelumbo nucifera]
16 Hb_002965_130 0.1656684761 - - PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Jatropha curcas]
17 Hb_000207_340 0.1669008467 transcription factor TF Family: GRAS hypothetical protein POPTR_0013s11930g [Populus trichocarpa]
18 Hb_001218_070 0.1675049158 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
19 Hb_000061_360 0.1677586853 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
20 Hb_000380_130 0.1793828903 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]

Gene co-expression network

sample Hb_105134_010 Hb_105134_010 Hb_003189_020 Hb_003189_020 Hb_105134_010--Hb_003189_020 Hb_046770_010 Hb_046770_010 Hb_105134_010--Hb_046770_010 Hb_005550_040 Hb_005550_040 Hb_105134_010--Hb_005550_040 Hb_094439_030 Hb_094439_030 Hb_105134_010--Hb_094439_030 Hb_156499_010 Hb_156499_010 Hb_105134_010--Hb_156499_010 Hb_026284_010 Hb_026284_010 Hb_105134_010--Hb_026284_010 Hb_003189_020--Hb_005550_040 Hb_178703_010 Hb_178703_010 Hb_003189_020--Hb_178703_010 Hb_003189_020--Hb_046770_010 Hb_000061_360 Hb_000061_360 Hb_003189_020--Hb_000061_360 Hb_004881_080 Hb_004881_080 Hb_003189_020--Hb_004881_080 Hb_001218_070 Hb_001218_070 Hb_046770_010--Hb_001218_070 Hb_109673_010 Hb_109673_010 Hb_046770_010--Hb_109673_010 Hb_000380_130 Hb_000380_130 Hb_046770_010--Hb_000380_130 Hb_046770_010--Hb_005550_040 Hb_005550_040--Hb_178703_010 Hb_005550_040--Hb_000061_360 Hb_001949_010 Hb_001949_010 Hb_005550_040--Hb_001949_010 Hb_094439_030--Hb_026284_010 Hb_033843_020 Hb_033843_020 Hb_094439_030--Hb_033843_020 Hb_094439_030--Hb_005550_040 Hb_002965_130 Hb_002965_130 Hb_094439_030--Hb_002965_130 Hb_094439_030--Hb_046770_010 Hb_003177_080 Hb_003177_080 Hb_156499_010--Hb_003177_080 Hb_000138_080 Hb_000138_080 Hb_156499_010--Hb_000138_080 Hb_000207_340 Hb_000207_340 Hb_156499_010--Hb_000207_340 Hb_001360_060 Hb_001360_060 Hb_156499_010--Hb_001360_060 Hb_009113_010 Hb_009113_010 Hb_156499_010--Hb_009113_010 Hb_026284_010--Hb_033843_020 Hb_018202_060 Hb_018202_060 Hb_026284_010--Hb_018202_060 Hb_026284_010--Hb_002965_130 Hb_026284_010--Hb_005550_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0238754 0.144916 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.790767 0.228815

CAGE analysis