Hb_004774_060

Information

Type -
Description -
Location Contig4774: 59384-60727
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004774_060 0.0 - - -
2 Hb_175968_010 0.0668839676 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
3 Hb_001279_220 0.0684652148 - - protein binding protein, putative [Ricinus communis]
4 Hb_004055_180 0.0686607104 - - cell wall invertase [Manihot esculenta]
5 Hb_033363_080 0.0713599466 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
6 Hb_097908_010 0.0713979374 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
7 Hb_000659_010 0.0984298814 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
8 Hb_148914_010 0.0987996907 - - glutathione s-transferase, putative [Ricinus communis]
9 Hb_002248_020 0.1012354776 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 [Populus euphratica]
10 Hb_001464_010 0.1045761399 - - PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Populus euphratica]
11 Hb_029571_010 0.1064544231 - - PREDICTED: polygalacturonase QRT3 [Jatropha curcas]
12 Hb_011145_020 0.1085858199 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
13 Hb_012796_050 0.1095955312 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
14 Hb_004712_080 0.1105150958 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
15 Hb_000563_610 0.1130260666 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]
16 Hb_004222_010 0.1141427721 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
17 Hb_010407_120 0.1157028788 - - PREDICTED: glutathione transferase GST 23-like [Jatropha curcas]
18 Hb_001691_060 0.1162733664 - - lipoxygenase, putative [Ricinus communis]
19 Hb_004195_240 0.1166052515 - - Peroxidase 72 precursor, putative [Ricinus communis]
20 Hb_001936_030 0.1208787325 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004774_060 Hb_004774_060 Hb_175968_010 Hb_175968_010 Hb_004774_060--Hb_175968_010 Hb_001279_220 Hb_001279_220 Hb_004774_060--Hb_001279_220 Hb_004055_180 Hb_004055_180 Hb_004774_060--Hb_004055_180 Hb_033363_080 Hb_033363_080 Hb_004774_060--Hb_033363_080 Hb_097908_010 Hb_097908_010 Hb_004774_060--Hb_097908_010 Hb_000659_010 Hb_000659_010 Hb_004774_060--Hb_000659_010 Hb_175968_010--Hb_001279_220 Hb_175968_010--Hb_000659_010 Hb_004222_010 Hb_004222_010 Hb_175968_010--Hb_004222_010 Hb_175968_010--Hb_097908_010 Hb_175968_010--Hb_004055_180 Hb_001454_300 Hb_001454_300 Hb_001279_220--Hb_001454_300 Hb_001369_320 Hb_001369_320 Hb_001279_220--Hb_001369_320 Hb_001279_220--Hb_000659_010 Hb_004712_080 Hb_004712_080 Hb_001279_220--Hb_004712_080 Hb_004055_180--Hb_097908_010 Hb_001464_010 Hb_001464_010 Hb_004055_180--Hb_001464_010 Hb_000563_610 Hb_000563_610 Hb_004055_180--Hb_000563_610 Hb_007417_020 Hb_007417_020 Hb_004055_180--Hb_007417_020 Hb_011145_020 Hb_011145_020 Hb_033363_080--Hb_011145_020 Hb_033363_080--Hb_175968_010 Hb_000438_190 Hb_000438_190 Hb_033363_080--Hb_000438_190 Hb_012796_050 Hb_012796_050 Hb_033363_080--Hb_012796_050 Hb_033363_080--Hb_004055_180 Hb_097908_010--Hb_001464_010 Hb_097908_010--Hb_000659_010 Hb_097908_010--Hb_007417_020 Hb_022815_020 Hb_022815_020 Hb_000659_010--Hb_022815_020 Hb_000659_010--Hb_004222_010 Hb_001003_020 Hb_001003_020 Hb_000659_010--Hb_001003_020 Hb_035726_020 Hb_035726_020 Hb_000659_010--Hb_035726_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.120901 0.332412 0.200778 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.34546 0.19995

CAGE analysis