Hb_004218_310

Information

Type -
Description -
Location Contig4218: 291590-300880
Sequence    

Annotation

kegg
ID rcu:RCOM_1452390
description NADPH:quinone oxidoreductase, putative (EC:1.6.5.2)
nr
ID XP_010514499.1
description PREDICTED: NADPH:quinone oxidoreductase-like [Camelina sativa]
swissprot
ID Q9LK88
description NADPH:quinone oxidoreductase OS=Arabidopsis thaliana GN=NQR PE=1 SV=1
trembl
ID A0A067KWE7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24535 PE=4 SV=1
Gene Ontology
ID GO:0005829
description nadph:quinone oxidoreductase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004218_310 0.0 - - PREDICTED: NADPH:quinone oxidoreductase-like [Camelina sativa]
2 Hb_003095_110 0.1256807876 - - GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
3 Hb_011576_010 0.1511879925 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
4 Hb_001949_010 0.1631181181 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
5 Hb_000230_020 0.1648912523 - - cysteine synthase, putative [Ricinus communis]
6 Hb_032223_020 0.1770334886 - - ATP binding protein, putative [Ricinus communis]
7 Hb_000645_250 0.1782789828 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
8 Hb_000751_070 0.1786671035 - - -
9 Hb_146930_010 0.1807377813 - - -
10 Hb_000567_150 0.1840981726 - - cysteine protease, putative [Ricinus communis]
11 Hb_178703_010 0.184659103 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
12 Hb_007130_010 0.1859826649 - - -
13 Hb_000751_050 0.1873038017 - - PREDICTED: extensin, partial [Solanum lycopersicum]
14 Hb_000226_110 0.1899413512 - - -
15 Hb_026419_010 0.1997655108 - - PREDICTED: cyclin-D3-1-like [Jatropha curcas]
16 Hb_000847_120 0.2006108353 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
17 Hb_110737_010 0.2008401753 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
18 Hb_060152_010 0.201077044 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
19 Hb_008376_020 0.2016023677 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
20 Hb_000751_060 0.2049215421 - - PREDICTED: extensin-2-like, partial [Sesamum indicum]

Gene co-expression network

sample Hb_004218_310 Hb_004218_310 Hb_003095_110 Hb_003095_110 Hb_004218_310--Hb_003095_110 Hb_011576_010 Hb_011576_010 Hb_004218_310--Hb_011576_010 Hb_001949_010 Hb_001949_010 Hb_004218_310--Hb_001949_010 Hb_000230_020 Hb_000230_020 Hb_004218_310--Hb_000230_020 Hb_032223_020 Hb_032223_020 Hb_004218_310--Hb_032223_020 Hb_000645_250 Hb_000645_250 Hb_004218_310--Hb_000645_250 Hb_003095_110--Hb_011576_010 Hb_000567_150 Hb_000567_150 Hb_003095_110--Hb_000567_150 Hb_000087_120 Hb_000087_120 Hb_003095_110--Hb_000087_120 Hb_003095_110--Hb_000230_020 Hb_000318_400 Hb_000318_400 Hb_003095_110--Hb_000318_400 Hb_011576_010--Hb_000230_020 Hb_011576_010--Hb_001949_010 Hb_000457_130 Hb_000457_130 Hb_011576_010--Hb_000457_130 Hb_000751_070 Hb_000751_070 Hb_011576_010--Hb_000751_070 Hb_001597_110 Hb_001597_110 Hb_011576_010--Hb_001597_110 Hb_005550_040 Hb_005550_040 Hb_001949_010--Hb_005550_040 Hb_178703_010 Hb_178703_010 Hb_001949_010--Hb_178703_010 Hb_001949_010--Hb_032223_020 Hb_000751_050 Hb_000751_050 Hb_001949_010--Hb_000751_050 Hb_000061_360 Hb_000061_360 Hb_001949_010--Hb_000061_360 Hb_000230_020--Hb_001949_010 Hb_026419_010 Hb_026419_010 Hb_000230_020--Hb_026419_010 Hb_079394_010 Hb_079394_010 Hb_000230_020--Hb_079394_010 Hb_000230_020--Hb_000087_120 Hb_032223_020--Hb_178703_010 Hb_006573_250 Hb_006573_250 Hb_032223_020--Hb_006573_250 Hb_008376_020 Hb_008376_020 Hb_032223_020--Hb_008376_020 Hb_032223_020--Hb_000645_250 Hb_032223_020--Hb_005550_040 Hb_000751_060 Hb_000751_060 Hb_000645_250--Hb_000751_060 Hb_000847_120 Hb_000847_120 Hb_000645_250--Hb_000847_120 Hb_000645_250--Hb_008376_020 Hb_060152_010 Hb_060152_010 Hb_000645_250--Hb_060152_010 Hb_000645_250--Hb_000751_070 Hb_000609_020 Hb_000609_020 Hb_000645_250--Hb_000609_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.192262 0.185689 0.0194211 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0348287 0 0.698592 0.502413

CAGE analysis