Hb_170193_030

Information

Type -
Description -
Location Contig170193: 3454-5490
Sequence    

Annotation

kegg
ID rcu:RCOM_0897880
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_012073448.1
description PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
swissprot
ID O64973
description Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2
trembl
ID A0A067KLU2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06173 PE=4 SV=1
Gene Ontology
ID GO:0000166
description probable disease resistance protein at5g63020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_170193_030 0.0 - - PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
2 Hb_001663_120 0.1509382523 - - PREDICTED: formin-like protein 1 isoform X1 [Jatropha curcas]
3 Hb_000215_250 0.1690907614 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
4 Hb_003847_170 0.1715488224 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
5 Hb_001963_020 0.1776346505 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
6 Hb_003562_030 0.1785349576 - - -
7 Hb_001493_020 0.1797499609 - - leucine-rich repeat receptor-like protein kinase [Manihot esculenta]
8 Hb_002026_080 0.1823696072 desease resistance Gene Name: TIR_2 nucleoside-triphosphatase, putative [Ricinus communis]
9 Hb_006736_010 0.1830172138 - - -
10 Hb_004223_180 0.1861248393 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
11 Hb_000818_080 0.1921815184 - - PREDICTED: monosaccharide-sensing protein 2 [Jatropha curcas]
12 Hb_001470_040 0.1924320469 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]
13 Hb_003092_050 0.1929439047 - - PREDICTED: putative chloride channel-like protein CLC-g [Jatropha curcas]
14 Hb_003640_010 0.1947180813 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
15 Hb_168180_010 0.1965537364 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000834_040 0.1975090484 - - PREDICTED: ras-related protein Rab7 [Cucumis melo]
17 Hb_029977_010 0.1975121919 - - catalytic, putative [Ricinus communis]
18 Hb_001430_090 0.1982055274 - - hypothetical protein JCGZ_05131 [Jatropha curcas]
19 Hb_004657_080 0.198618682 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
20 Hb_001486_060 0.1987648698 - - PREDICTED: uncharacterized protein LOC105632622 [Jatropha curcas]

Gene co-expression network

sample Hb_170193_030 Hb_170193_030 Hb_001663_120 Hb_001663_120 Hb_170193_030--Hb_001663_120 Hb_000215_250 Hb_000215_250 Hb_170193_030--Hb_000215_250 Hb_003847_170 Hb_003847_170 Hb_170193_030--Hb_003847_170 Hb_001963_020 Hb_001963_020 Hb_170193_030--Hb_001963_020 Hb_003562_030 Hb_003562_030 Hb_170193_030--Hb_003562_030 Hb_001493_020 Hb_001493_020 Hb_170193_030--Hb_001493_020 Hb_001564_090 Hb_001564_090 Hb_001663_120--Hb_001564_090 Hb_029866_080 Hb_029866_080 Hb_001663_120--Hb_029866_080 Hb_085315_010 Hb_085315_010 Hb_001663_120--Hb_085315_010 Hb_004462_040 Hb_004462_040 Hb_001663_120--Hb_004462_040 Hb_164117_010 Hb_164117_010 Hb_001663_120--Hb_164117_010 Hb_005333_120 Hb_005333_120 Hb_001663_120--Hb_005333_120 Hb_002420_010 Hb_002420_010 Hb_000215_250--Hb_002420_010 Hb_002811_020 Hb_002811_020 Hb_000215_250--Hb_002811_020 Hb_013848_030 Hb_013848_030 Hb_000215_250--Hb_013848_030 Hb_003092_050 Hb_003092_050 Hb_000215_250--Hb_003092_050 Hb_000215_250--Hb_001493_020 Hb_082683_010 Hb_082683_010 Hb_000215_250--Hb_082683_010 Hb_000112_050 Hb_000112_050 Hb_003847_170--Hb_000112_050 Hb_001470_040 Hb_001470_040 Hb_003847_170--Hb_001470_040 Hb_002307_010 Hb_002307_010 Hb_003847_170--Hb_002307_010 Hb_003847_170--Hb_001963_020 Hb_002475_030 Hb_002475_030 Hb_003847_170--Hb_002475_030 Hb_001114_120 Hb_001114_120 Hb_003847_170--Hb_001114_120 Hb_001963_020--Hb_001470_040 Hb_000003_510 Hb_000003_510 Hb_001963_020--Hb_000003_510 Hb_000276_030 Hb_000276_030 Hb_001963_020--Hb_000276_030 Hb_001369_620 Hb_001369_620 Hb_001963_020--Hb_001369_620 Hb_001053_110 Hb_001053_110 Hb_001963_020--Hb_001053_110 Hb_010174_170 Hb_010174_170 Hb_001963_020--Hb_010174_170 Hb_000834_040 Hb_000834_040 Hb_003562_030--Hb_000834_040 Hb_001040_200 Hb_001040_200 Hb_003562_030--Hb_001040_200 Hb_188281_050 Hb_188281_050 Hb_003562_030--Hb_188281_050 Hb_003562_030--Hb_000112_050 Hb_003640_010 Hb_003640_010 Hb_003562_030--Hb_003640_010 Hb_001047_170 Hb_001047_170 Hb_003562_030--Hb_001047_170 Hb_029977_010 Hb_029977_010 Hb_001493_020--Hb_029977_010 Hb_000793_040 Hb_000793_040 Hb_001493_020--Hb_000793_040 Hb_000317_220 Hb_000317_220 Hb_001493_020--Hb_000317_220 Hb_001493_020--Hb_188281_050 Hb_020378_010 Hb_020378_010 Hb_001493_020--Hb_020378_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.286269 3.00763 1.19557 5.84397 1.26449 0.0391994
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0254472 0.334273 9.99925 3.72174

CAGE analysis