Hb_020378_010

Information

Type -
Description -
Location Contig20378: 6536-7672
Sequence    

Annotation

kegg
ID tcc:TCM_005811
description Acyl-CoA sterol acyl transferase 1, putative
nr
ID XP_012065639.1
description PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
swissprot
ID Q9SV07
description Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana GN=ASAT1 PE=1 SV=1
trembl
ID A0A061DVZ9
description Acyl-CoA sterol acyl transferase 1, putative OS=Theobroma cacao GN=TCM_005811 PE=4 SV=1
Gene Ontology
ID GO:0047196
description acyl- --sterol o-acyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020378_010 0.0 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
2 Hb_000793_040 0.1208387978 - - PREDICTED: transcription factor LHW [Jatropha curcas]
3 Hb_001493_020 0.1372741845 - - leucine-rich repeat receptor-like protein kinase [Manihot esculenta]
4 Hb_000020_030 0.1545775702 - - protein binding protein, putative [Ricinus communis]
5 Hb_002003_040 0.1560352351 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Jatropha curcas]
6 Hb_001486_060 0.1669255745 - - PREDICTED: uncharacterized protein LOC105632622 [Jatropha curcas]
7 Hb_029977_010 0.1689341595 - - catalytic, putative [Ricinus communis]
8 Hb_000317_220 0.1707122049 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002307_010 0.1719703942 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
10 Hb_007943_020 0.1739196311 - - transcription factor, putative [Ricinus communis]
11 Hb_050241_010 0.1746812029 - - PREDICTED: uncharacterized protein LOC105129233 isoform X1 [Populus euphratica]
12 Hb_002420_010 0.1766372115 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
13 Hb_000155_040 0.1803706096 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
14 Hb_000215_250 0.1812906079 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
15 Hb_002671_060 0.1839886832 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 [Jatropha curcas]
16 Hb_002928_120 0.1843276478 - - 1,4-alpha-glucan branching enzyme [Manihot esculenta]
17 Hb_002026_080 0.1844036351 desease resistance Gene Name: TIR_2 nucleoside-triphosphatase, putative [Ricinus communis]
18 Hb_002042_160 0.1846763404 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
19 Hb_005288_210 0.1848061693 - - hypothetical protein VITISV_017217 [Vitis vinifera]
20 Hb_001008_110 0.185100881 - - -

Gene co-expression network

sample Hb_020378_010 Hb_020378_010 Hb_000793_040 Hb_000793_040 Hb_020378_010--Hb_000793_040 Hb_001493_020 Hb_001493_020 Hb_020378_010--Hb_001493_020 Hb_000020_030 Hb_000020_030 Hb_020378_010--Hb_000020_030 Hb_002003_040 Hb_002003_040 Hb_020378_010--Hb_002003_040 Hb_001486_060 Hb_001486_060 Hb_020378_010--Hb_001486_060 Hb_029977_010 Hb_029977_010 Hb_020378_010--Hb_029977_010 Hb_000793_040--Hb_001486_060 Hb_002928_120 Hb_002928_120 Hb_000793_040--Hb_002928_120 Hb_005288_210 Hb_005288_210 Hb_000793_040--Hb_005288_210 Hb_000793_040--Hb_001493_020 Hb_002420_010 Hb_002420_010 Hb_000793_040--Hb_002420_010 Hb_001493_020--Hb_029977_010 Hb_000215_250 Hb_000215_250 Hb_001493_020--Hb_000215_250 Hb_000317_220 Hb_000317_220 Hb_001493_020--Hb_000317_220 Hb_188281_050 Hb_188281_050 Hb_001493_020--Hb_188281_050 Hb_007943_020 Hb_007943_020 Hb_000020_030--Hb_007943_020 Hb_002970_070 Hb_002970_070 Hb_000020_030--Hb_002970_070 Hb_002042_160 Hb_002042_160 Hb_000020_030--Hb_002042_160 Hb_022501_020 Hb_022501_020 Hb_000020_030--Hb_022501_020 Hb_003226_030 Hb_003226_030 Hb_000020_030--Hb_003226_030 Hb_005357_020 Hb_005357_020 Hb_000020_030--Hb_005357_020 Hb_002003_040--Hb_002420_010 Hb_002671_060 Hb_002671_060 Hb_002003_040--Hb_002671_060 Hb_000261_320 Hb_000261_320 Hb_002003_040--Hb_000261_320 Hb_002833_020 Hb_002833_020 Hb_002003_040--Hb_002833_020 Hb_082683_010 Hb_082683_010 Hb_002003_040--Hb_082683_010 Hb_001008_110 Hb_001008_110 Hb_002003_040--Hb_001008_110 Hb_000818_080 Hb_000818_080 Hb_001486_060--Hb_000818_080 Hb_002026_080 Hb_002026_080 Hb_001486_060--Hb_002026_080 Hb_000483_130 Hb_000483_130 Hb_001486_060--Hb_000483_130 Hb_086336_010 Hb_086336_010 Hb_001486_060--Hb_086336_010 Hb_004657_080 Hb_004657_080 Hb_001486_060--Hb_004657_080 Hb_004316_030 Hb_004316_030 Hb_029977_010--Hb_004316_030 Hb_001564_090 Hb_001564_090 Hb_029977_010--Hb_001564_090 Hb_001021_030 Hb_001021_030 Hb_029977_010--Hb_001021_030 Hb_029977_010--Hb_002026_080 Hb_184942_010 Hb_184942_010 Hb_029977_010--Hb_184942_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.440298 2.19468 0.594544 2.9527 0 0.29786
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.216449 0.034051 0 4.17834 1.61576

CAGE analysis