Hb_004837_220

Information

Type -
Description -
Location Contig4837: 188610-192927
Sequence    

Annotation

kegg
ID rcu:RCOM_1577810
description Sulfite reductase [ferredoxin], putative (EC:1.8.7.1)
nr
ID XP_012090019.1
description PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
swissprot
ID O82802
description Sulfite reductase 1 [ferredoxin], chloroplastic OS=Nicotiana tabacum GN=SIR1 PE=1 SV=1
trembl
ID A0A067JE50
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25933 PE=4 SV=1
Gene Ontology
ID GO:0009941
description sulfite reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44890: 188633-193245
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004837_220 0.0 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
2 Hb_163968_010 0.1153780682 - - vesicle-associated membrane protein, putative [Ricinus communis]
3 Hb_005000_140 0.1157361325 - - PREDICTED: uncharacterized protein LOC105637876 isoform X1 [Jatropha curcas]
4 Hb_010368_080 0.1159287648 - - PREDICTED: uncharacterized protein LOC105630287 [Jatropha curcas]
5 Hb_004267_060 0.1160585574 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_001085_300 0.1180263466 - - PREDICTED: cyclin-dependent kinase inhibitor 5 [Jatropha curcas]
7 Hb_000000_340 0.1216284264 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 29-like isoform X1 [Jatropha curcas]
8 Hb_000692_210 0.1225243388 - - PREDICTED: 24-methylenesterol C-methyltransferase 2 [Jatropha curcas]
9 Hb_080147_020 0.122526418 - - 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
10 Hb_005394_010 0.1229362389 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]
11 Hb_129204_020 0.1232250619 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Jatropha curcas]
12 Hb_001318_150 0.1248111778 - - PREDICTED: shaggy-related protein kinase alpha-like [Jatropha curcas]
13 Hb_052135_020 0.1255255569 - - PREDICTED: MAP kinase kinase MKK1/SSP32-like [Jatropha curcas]
14 Hb_001133_090 0.1256885166 - - hypothetical protein POPTR_0012s02680g [Populus trichocarpa]
15 Hb_002107_100 0.1282642391 - - PREDICTED: la-related protein 1C-like isoform X3 [Jatropha curcas]
16 Hb_000421_110 0.1284998126 - - PREDICTED: V-type proton ATPase subunit a1 isoform X2 [Jatropha curcas]
17 Hb_010068_070 0.1310783867 - - calcium-dependent protein kinase, putative [Ricinus communis]
18 Hb_001221_580 0.131438898 - - PREDICTED: recQ-mediated genome instability protein 1 [Jatropha curcas]
19 Hb_156635_020 0.1317106089 - - PREDICTED: L-lactate dehydrogenase B [Jatropha curcas]
20 Hb_000418_050 0.134109313 - - PREDICTED: uncharacterized protein LOC105636892 [Jatropha curcas]

Gene co-expression network

sample Hb_004837_220 Hb_004837_220 Hb_163968_010 Hb_163968_010 Hb_004837_220--Hb_163968_010 Hb_005000_140 Hb_005000_140 Hb_004837_220--Hb_005000_140 Hb_010368_080 Hb_010368_080 Hb_004837_220--Hb_010368_080 Hb_004267_060 Hb_004267_060 Hb_004837_220--Hb_004267_060 Hb_001085_300 Hb_001085_300 Hb_004837_220--Hb_001085_300 Hb_000000_340 Hb_000000_340 Hb_004837_220--Hb_000000_340 Hb_124951_010 Hb_124951_010 Hb_163968_010--Hb_124951_010 Hb_002600_130 Hb_002600_130 Hb_163968_010--Hb_002600_130 Hb_000134_030 Hb_000134_030 Hb_163968_010--Hb_000134_030 Hb_000076_100 Hb_000076_100 Hb_163968_010--Hb_000076_100 Hb_163968_010--Hb_004267_060 Hb_156635_020 Hb_156635_020 Hb_005000_140--Hb_156635_020 Hb_000012_210 Hb_000012_210 Hb_005000_140--Hb_000012_210 Hb_152910_010 Hb_152910_010 Hb_005000_140--Hb_152910_010 Hb_005649_090 Hb_005649_090 Hb_005000_140--Hb_005649_090 Hb_005000_140--Hb_001085_300 Hb_012305_140 Hb_012305_140 Hb_010368_080--Hb_012305_140 Hb_001369_030 Hb_001369_030 Hb_010368_080--Hb_001369_030 Hb_010368_080--Hb_004267_060 Hb_004526_010 Hb_004526_010 Hb_010368_080--Hb_004526_010 Hb_000796_120 Hb_000796_120 Hb_010368_080--Hb_000796_120 Hb_000260_770 Hb_000260_770 Hb_004267_060--Hb_000260_770 Hb_004267_060--Hb_001369_030 Hb_001009_120 Hb_001009_120 Hb_004267_060--Hb_001009_120 Hb_000062_360 Hb_000062_360 Hb_004267_060--Hb_000062_360 Hb_000086_430 Hb_000086_430 Hb_004267_060--Hb_000086_430 Hb_001621_110 Hb_001621_110 Hb_004267_060--Hb_001621_110 Hb_056196_060 Hb_056196_060 Hb_001085_300--Hb_056196_060 Hb_000272_110 Hb_000272_110 Hb_001085_300--Hb_000272_110 Hb_008112_010 Hb_008112_010 Hb_001085_300--Hb_008112_010 Hb_001318_150 Hb_001318_150 Hb_001085_300--Hb_001318_150 Hb_003018_030 Hb_003018_030 Hb_001085_300--Hb_003018_030 Hb_000890_160 Hb_000890_160 Hb_000000_340--Hb_000890_160 Hb_010068_070 Hb_010068_070 Hb_000000_340--Hb_010068_070 Hb_000866_140 Hb_000866_140 Hb_000000_340--Hb_000866_140 Hb_001376_010 Hb_001376_010 Hb_000000_340--Hb_001376_010 Hb_008725_050 Hb_008725_050 Hb_000000_340--Hb_008725_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.2445 59.7719 82.6608 37.2308 12.1346 15.8165
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.50591 7.43947 10.087 34.9279 14.1045

CAGE analysis