Hb_004267_060

Information

Type -
Description -
Location Contig4267: 94667-110566
Sequence    

Annotation

kegg
ID rcu:RCOM_1593140
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.10.2)
nr
ID XP_002510316.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q8RY67
description Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2
trembl
ID B9R7M3
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_1593140 PE=4 SV=1
Gene Ontology
ID GO:0004672
description inactive protein kinase selmodraft_444075-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42046: 94640-97246 , PASA_asmbl_42047: 96196-96312 , PASA_asmbl_42050: 97720-98433 , PASA_asmbl_42051: 98448-100008
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004267_060 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_000260_770 0.0914643877 - - er lumen protein retaining receptor, putative [Ricinus communis]
3 Hb_001369_030 0.0915340168 - - PREDICTED: ceramide kinase isoform X1 [Jatropha curcas]
4 Hb_001009_120 0.100798916 - - PREDICTED: transcription factor GTE10 isoform X2 [Jatropha curcas]
5 Hb_000062_360 0.1010776687 - - PREDICTED: DNA polymerase alpha subunit B [Jatropha curcas]
6 Hb_000086_430 0.1011634087 - - hypothetical protein JCGZ_17649 [Jatropha curcas]
7 Hb_001621_110 0.1026125207 - - PREDICTED: uncharacterized protein LOC105647362 [Jatropha curcas]
8 Hb_001558_060 0.1062573855 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 isoform X2 [Jatropha curcas]
9 Hb_009178_010 0.1083652952 - - PREDICTED: uncharacterized protein LOC105637474 [Jatropha curcas]
10 Hb_010368_080 0.1102046523 - - PREDICTED: uncharacterized protein LOC105630287 [Jatropha curcas]
11 Hb_007777_010 0.1114146902 - - PREDICTED: UPF0187 protein At3g61320, chloroplastic [Tarenaya hassleriana]
12 Hb_000796_120 0.1115028301 - - PREDICTED: SWR1-complex protein 4 isoform X3 [Jatropha curcas]
13 Hb_152910_010 0.111972249 - - PREDICTED: uncharacterized protein LOC105632212 [Jatropha curcas]
14 Hb_009659_030 0.1124657767 - - PREDICTED: beta-galactosidase 17 [Jatropha curcas]
15 Hb_008725_050 0.1127422527 - - syntaxin, putative [Ricinus communis]
16 Hb_000139_220 0.1144234441 - - leucine rich repeat-containing protein, putative [Ricinus communis]
17 Hb_003470_040 0.1158898529 - - PREDICTED: 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Jatropha curcas]
18 Hb_004837_220 0.1160585574 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
19 Hb_004319_050 0.1162975811 - - PREDICTED: senescence-associated carboxylesterase 101-like [Populus euphratica]
20 Hb_000940_050 0.1171632102 - - hypothetical protein JCGZ_19588 [Jatropha curcas]

Gene co-expression network

sample Hb_004267_060 Hb_004267_060 Hb_000260_770 Hb_000260_770 Hb_004267_060--Hb_000260_770 Hb_001369_030 Hb_001369_030 Hb_004267_060--Hb_001369_030 Hb_001009_120 Hb_001009_120 Hb_004267_060--Hb_001009_120 Hb_000062_360 Hb_000062_360 Hb_004267_060--Hb_000062_360 Hb_000086_430 Hb_000086_430 Hb_004267_060--Hb_000086_430 Hb_001621_110 Hb_001621_110 Hb_004267_060--Hb_001621_110 Hb_000994_020 Hb_000994_020 Hb_000260_770--Hb_000994_020 Hb_012940_040 Hb_012940_040 Hb_000260_770--Hb_012940_040 Hb_000139_320 Hb_000139_320 Hb_000260_770--Hb_000139_320 Hb_003470_040 Hb_003470_040 Hb_000260_770--Hb_003470_040 Hb_004319_050 Hb_004319_050 Hb_000260_770--Hb_004319_050 Hb_004724_370 Hb_004724_370 Hb_000260_770--Hb_004724_370 Hb_001369_030--Hb_000086_430 Hb_000212_300 Hb_000212_300 Hb_001369_030--Hb_000212_300 Hb_001369_030--Hb_000062_360 Hb_001369_030--Hb_001009_120 Hb_000836_540 Hb_000836_540 Hb_001369_030--Hb_000836_540 Hb_033152_090 Hb_033152_090 Hb_001009_120--Hb_033152_090 Hb_000640_190 Hb_000640_190 Hb_001009_120--Hb_000640_190 Hb_000956_040 Hb_000956_040 Hb_001009_120--Hb_000956_040 Hb_006452_180 Hb_006452_180 Hb_001009_120--Hb_006452_180 Hb_001009_120--Hb_004319_050 Hb_009178_010 Hb_009178_010 Hb_001009_120--Hb_009178_010 Hb_000062_360--Hb_000212_300 Hb_001322_020 Hb_001322_020 Hb_000062_360--Hb_001322_020 Hb_172257_010 Hb_172257_010 Hb_000062_360--Hb_172257_010 Hb_000062_360--Hb_003470_040 Hb_000048_080 Hb_000048_080 Hb_000086_430--Hb_000048_080 Hb_001500_120 Hb_001500_120 Hb_000086_430--Hb_001500_120 Hb_000086_430--Hb_001009_120 Hb_001558_060 Hb_001558_060 Hb_000086_430--Hb_001558_060 Hb_004225_060 Hb_004225_060 Hb_000086_430--Hb_004225_060 Hb_007777_010 Hb_007777_010 Hb_001621_110--Hb_007777_010 Hb_004725_030 Hb_004725_030 Hb_001621_110--Hb_004725_030 Hb_000890_010 Hb_000890_010 Hb_001621_110--Hb_000890_010 Hb_001621_110--Hb_000086_430 Hb_011609_010 Hb_011609_010 Hb_001621_110--Hb_011609_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.81514 3.56859 5.71201 1.87358 1.30798 1.3821
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.4956 0.843729 0.933257 2.25037 1.50233

CAGE analysis