Hb_000212_300

Information

Type -
Description -
Location Contig212: 317494-321299
Sequence    

Annotation

kegg
ID vvi:100252836
description pathogenesis-related protein 5-like
nr
ID XP_012085785.1
description PREDICTED: thaumatin-like protein [Jatropha curcas]
swissprot
ID P28493
description Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1
trembl
ID A0A067JSE7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18044 PE=4 SV=1
Gene Ontology
ID GO:0004497
description thaumatin-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000212_300 0.0 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
2 Hb_001369_030 0.0836259936 - - PREDICTED: ceramide kinase isoform X1 [Jatropha curcas]
3 Hb_000062_360 0.0885733754 - - PREDICTED: DNA polymerase alpha subunit B [Jatropha curcas]
4 Hb_027380_210 0.1015010972 - - PREDICTED: uncharacterized protein LOC105634030 [Jatropha curcas]
5 Hb_011671_110 0.1075399255 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
6 Hb_015026_020 0.1147695636 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os07g0563300 [Jatropha curcas]
7 Hb_005941_020 0.1157097744 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
8 Hb_012305_140 0.1195095808 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X1 [Jatropha curcas]
9 Hb_005694_130 0.1197457476 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
10 Hb_001894_160 0.1211053911 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001009_120 0.1221633332 - - PREDICTED: transcription factor GTE10 isoform X2 [Jatropha curcas]
12 Hb_000345_290 0.1226565132 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_000803_090 0.1228490843 - - PREDICTED: transcription initiation factor IIB isoform X1 [Jatropha curcas]
14 Hb_001247_210 0.1241366149 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004718_060 0.1247047605 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform X1 [Jatropha curcas]
16 Hb_000609_110 0.1264770836 - - PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Jatropha curcas]
17 Hb_005873_020 0.1280748717 - - PREDICTED: ATP-dependent zinc metalloprotease FtsH [Jatropha curcas]
18 Hb_010368_080 0.1283655895 - - PREDICTED: uncharacterized protein LOC105630287 [Jatropha curcas]
19 Hb_003925_060 0.1295613892 - - PREDICTED: uncharacterized protein LOC105645218 isoform X1 [Jatropha curcas]
20 Hb_000418_050 0.1304211768 - - PREDICTED: uncharacterized protein LOC105636892 [Jatropha curcas]

Gene co-expression network

sample Hb_000212_300 Hb_000212_300 Hb_001369_030 Hb_001369_030 Hb_000212_300--Hb_001369_030 Hb_000062_360 Hb_000062_360 Hb_000212_300--Hb_000062_360 Hb_027380_210 Hb_027380_210 Hb_000212_300--Hb_027380_210 Hb_011671_110 Hb_011671_110 Hb_000212_300--Hb_011671_110 Hb_015026_020 Hb_015026_020 Hb_000212_300--Hb_015026_020 Hb_005941_020 Hb_005941_020 Hb_000212_300--Hb_005941_020 Hb_000086_430 Hb_000086_430 Hb_001369_030--Hb_000086_430 Hb_001369_030--Hb_000062_360 Hb_001009_120 Hb_001009_120 Hb_001369_030--Hb_001009_120 Hb_004267_060 Hb_004267_060 Hb_001369_030--Hb_004267_060 Hb_000836_540 Hb_000836_540 Hb_001369_030--Hb_000836_540 Hb_001322_020 Hb_001322_020 Hb_000062_360--Hb_001322_020 Hb_000062_360--Hb_004267_060 Hb_172257_010 Hb_172257_010 Hb_000062_360--Hb_172257_010 Hb_003470_040 Hb_003470_040 Hb_000062_360--Hb_003470_040 Hb_161549_010 Hb_161549_010 Hb_027380_210--Hb_161549_010 Hb_000609_110 Hb_000609_110 Hb_027380_210--Hb_000609_110 Hb_000453_230 Hb_000453_230 Hb_027380_210--Hb_000453_230 Hb_005694_130 Hb_005694_130 Hb_027380_210--Hb_005694_130 Hb_027380_210--Hb_000836_540 Hb_001894_160 Hb_001894_160 Hb_011671_110--Hb_001894_160 Hb_011671_110--Hb_005941_020 Hb_033930_010 Hb_033930_010 Hb_011671_110--Hb_033930_010 Hb_011671_110--Hb_015026_020 Hb_001776_200 Hb_001776_200 Hb_011671_110--Hb_001776_200 Hb_005394_010 Hb_005394_010 Hb_011671_110--Hb_005394_010 Hb_000928_250 Hb_000928_250 Hb_015026_020--Hb_000928_250 Hb_015026_020--Hb_001894_160 Hb_003106_200 Hb_003106_200 Hb_015026_020--Hb_003106_200 Hb_015026_020--Hb_005941_020 Hb_000076_100 Hb_000076_100 Hb_015026_020--Hb_000076_100 Hb_005941_020--Hb_001894_160 Hb_005941_020--Hb_033930_010 Hb_000317_190 Hb_000317_190 Hb_005941_020--Hb_000317_190 Hb_000086_640 Hb_000086_640 Hb_005941_020--Hb_000086_640
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.101455 0.368799 0.587665 0.18005 0.109783 0.1218
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.115929 0.0456039 0.0429432 0.109126 0.191312

CAGE analysis