Hb_000453_230

Information

Type -
Description -
Location Contig453: 160604-169616
Sequence    

Annotation

kegg
ID rcu:RCOM_1500510
description Nitric-oxide synthase, putative (EC:1.14.13.39)
nr
ID XP_012090452.1
description PREDICTED: NO-associated protein 1, chloroplastic/mitochondrial [Jatropha curcas]
swissprot
ID Q66GP9
description NO-associated protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NOA1 PE=1 SV=1
trembl
ID A0A067JEV0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26262 PE=4 SV=1
Gene Ontology
ID GO:0004517
description no-associated protein chloroplastic mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43277: 161223-161427 , PASA_asmbl_43278: 162015-165123 , PASA_asmbl_43279: 165443-167465
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000453_230 0.0 - - PREDICTED: NO-associated protein 1, chloroplastic/mitochondrial [Jatropha curcas]
2 Hb_004837_020 0.0794789615 - - PREDICTED: uncharacterized protein LOC105648271 [Jatropha curcas]
3 Hb_027380_210 0.0810525292 - - PREDICTED: uncharacterized protein LOC105634030 [Jatropha curcas]
4 Hb_002447_050 0.084111764 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
5 Hb_000665_150 0.0957136494 - - heparanase, putative [Ricinus communis]
6 Hb_161549_010 0.0967438577 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000836_540 0.0980533531 - - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Theobroma cacao]
8 Hb_001488_210 0.098312088 - - PREDICTED: protein RIK [Jatropha curcas]
9 Hb_002686_410 0.0987781371 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like isoform X2 [Jatropha curcas]
10 Hb_005873_020 0.1034086222 - - PREDICTED: ATP-dependent zinc metalloprotease FtsH [Jatropha curcas]
11 Hb_000300_560 0.1052314651 - - PREDICTED: probable glycosyltransferase At5g03795 isoform X1 [Jatropha curcas]
12 Hb_004577_010 0.1061044932 - - PREDICTED: transmembrane protein 45A [Prunus mume]
13 Hb_001277_340 0.1081251711 - - aldo/keto reductase, putative [Ricinus communis]
14 Hb_000609_110 0.109192352 - - PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Jatropha curcas]
15 Hb_009178_010 0.1101022695 - - PREDICTED: uncharacterized protein LOC105637474 [Jatropha curcas]
16 Hb_001624_040 0.1104092802 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Jatropha curcas]
17 Hb_001396_020 0.1113363247 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
18 Hb_000878_160 0.1116146703 - - PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial [Jatropha curcas]
19 Hb_003925_060 0.1119102633 - - PREDICTED: uncharacterized protein LOC105645218 isoform X1 [Jatropha curcas]
20 Hb_054865_020 0.1126672664 transcription factor TF Family: HB homeobox leucine zipper family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_000453_230 Hb_000453_230 Hb_004837_020 Hb_004837_020 Hb_000453_230--Hb_004837_020 Hb_027380_210 Hb_027380_210 Hb_000453_230--Hb_027380_210 Hb_002447_050 Hb_002447_050 Hb_000453_230--Hb_002447_050 Hb_000665_150 Hb_000665_150 Hb_000453_230--Hb_000665_150 Hb_161549_010 Hb_161549_010 Hb_000453_230--Hb_161549_010 Hb_000836_540 Hb_000836_540 Hb_000453_230--Hb_000836_540 Hb_000665_070 Hb_000665_070 Hb_004837_020--Hb_000665_070 Hb_000771_170 Hb_000771_170 Hb_004837_020--Hb_000771_170 Hb_004837_020--Hb_000665_150 Hb_007576_180 Hb_007576_180 Hb_004837_020--Hb_007576_180 Hb_004837_020--Hb_002447_050 Hb_027380_210--Hb_161549_010 Hb_000609_110 Hb_000609_110 Hb_027380_210--Hb_000609_110 Hb_005694_130 Hb_005694_130 Hb_027380_210--Hb_005694_130 Hb_027380_210--Hb_000836_540 Hb_000212_300 Hb_000212_300 Hb_027380_210--Hb_000212_300 Hb_001663_130 Hb_001663_130 Hb_002447_050--Hb_001663_130 Hb_029552_020 Hb_029552_020 Hb_002447_050--Hb_029552_020 Hb_000529_130 Hb_000529_130 Hb_002447_050--Hb_000529_130 Hb_000331_340 Hb_000331_340 Hb_002447_050--Hb_000331_340 Hb_000300_560 Hb_000300_560 Hb_002447_050--Hb_000300_560 Hb_000260_160 Hb_000260_160 Hb_000665_150--Hb_000260_160 Hb_000665_150--Hb_000665_070 Hb_003529_140 Hb_003529_140 Hb_000665_150--Hb_003529_140 Hb_004162_220 Hb_004162_220 Hb_000665_150--Hb_004162_220 Hb_161549_010--Hb_000609_110 Hb_005941_020 Hb_005941_020 Hb_161549_010--Hb_005941_020 Hb_000805_200 Hb_000805_200 Hb_161549_010--Hb_000805_200 Hb_161549_010--Hb_000836_540 Hb_000836_540--Hb_000609_110 Hb_000836_540--Hb_005694_130 Hb_001369_030 Hb_001369_030 Hb_000836_540--Hb_001369_030 Hb_003925_060 Hb_003925_060 Hb_000836_540--Hb_003925_060 Hb_002056_100 Hb_002056_100 Hb_000836_540--Hb_002056_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.9412 5.2727 7.85951 2.44438 2.12132 2.04932
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.857304 0.911986 0.501114 2.75644 5.90779

CAGE analysis