Hb_000300_560

Information

Type -
Description -
Location Contig300: 524452-527629
Sequence    

Annotation

kegg
ID vvi:100265001
description probable glycosyltransferase At5g03795
nr
ID XP_012070429.1
description PREDICTED: probable glycosyltransferase At5g03795 isoform X1 [Jatropha curcas]
swissprot
ID Q9FFN2
description Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2
trembl
ID A0A067KU74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02707 PE=4 SV=1
Gene Ontology
ID GO:0050508
description probable glycosyltransferase at5g03795

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31621: 524413-527602 , PASA_asmbl_31622: 525350-525633
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000300_560 0.0 - - PREDICTED: probable glycosyltransferase At5g03795 isoform X1 [Jatropha curcas]
2 Hb_001396_020 0.0646205771 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
3 Hb_011188_010 0.0761773374 - - PREDICTED: uncharacterized protein LOC105642145 isoform X1 [Jatropha curcas]
4 Hb_000482_050 0.0762263839 - - PREDICTED: UDP-sulfoquinovose synthase, chloroplastic [Jatropha curcas]
5 Hb_004577_010 0.0779216331 - - PREDICTED: transmembrane protein 45A [Prunus mume]
6 Hb_021596_020 0.0800487641 - - hypothetical protein JCGZ_02034 [Jatropha curcas]
7 Hb_001279_020 0.080521137 - - PREDICTED: uncharacterized protein LOC105633240 [Jatropha curcas]
8 Hb_001663_130 0.081433573 - - acyl-CoA thioesterase, putative [Ricinus communis]
9 Hb_005305_130 0.084835585 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
10 Hb_000172_360 0.0851096561 - - PREDICTED: apoptotic chromatin condensation inducer in the nucleus [Jatropha curcas]
11 Hb_009158_060 0.0859855054 - - PREDICTED: CDPK-related kinase 3 [Jatropha curcas]
12 Hb_029552_020 0.0873822839 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001623_490 0.0875768279 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
14 Hb_003058_140 0.0879245376 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000878_160 0.0893864404 - - PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial [Jatropha curcas]
16 Hb_002828_060 0.0933450679 - - PREDICTED: probable phytol kinase 3, chloroplastic [Jatropha curcas]
17 Hb_003071_030 0.0935140376 - - PREDICTED: 20 kDa chaperonin, chloroplastic [Jatropha curcas]
18 Hb_070624_010 0.0935389744 - - PREDICTED: reticulocalbin-2 [Jatropha curcas]
19 Hb_002686_410 0.0961109711 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like isoform X2 [Jatropha curcas]
20 Hb_000748_090 0.0964420254 - - glucose inhibited division protein A, putative [Ricinus communis]

Gene co-expression network

sample Hb_000300_560 Hb_000300_560 Hb_001396_020 Hb_001396_020 Hb_000300_560--Hb_001396_020 Hb_011188_010 Hb_011188_010 Hb_000300_560--Hb_011188_010 Hb_000482_050 Hb_000482_050 Hb_000300_560--Hb_000482_050 Hb_004577_010 Hb_004577_010 Hb_000300_560--Hb_004577_010 Hb_021596_020 Hb_021596_020 Hb_000300_560--Hb_021596_020 Hb_001279_020 Hb_001279_020 Hb_000300_560--Hb_001279_020 Hb_001396_020--Hb_001279_020 Hb_001396_020--Hb_000482_050 Hb_002600_070 Hb_002600_070 Hb_001396_020--Hb_002600_070 Hb_000529_130 Hb_000529_130 Hb_001396_020--Hb_000529_130 Hb_012779_080 Hb_012779_080 Hb_001396_020--Hb_012779_080 Hb_009078_020 Hb_009078_020 Hb_011188_010--Hb_009078_020 Hb_001059_060 Hb_001059_060 Hb_011188_010--Hb_001059_060 Hb_000477_070 Hb_000477_070 Hb_011188_010--Hb_000477_070 Hb_000594_060 Hb_000594_060 Hb_011188_010--Hb_000594_060 Hb_011188_010--Hb_004577_010 Hb_002828_060 Hb_002828_060 Hb_000482_050--Hb_002828_060 Hb_004629_030 Hb_004629_030 Hb_000482_050--Hb_004629_030 Hb_000482_050--Hb_002600_070 Hb_007012_030 Hb_007012_030 Hb_000482_050--Hb_007012_030 Hb_000748_090 Hb_000748_090 Hb_000482_050--Hb_000748_090 Hb_004162_220 Hb_004162_220 Hb_004577_010--Hb_004162_220 Hb_001663_130 Hb_001663_130 Hb_004577_010--Hb_001663_130 Hb_002686_410 Hb_002686_410 Hb_004577_010--Hb_002686_410 Hb_003058_140 Hb_003058_140 Hb_004577_010--Hb_003058_140 Hb_001504_010 Hb_001504_010 Hb_021596_020--Hb_001504_010 Hb_002684_020 Hb_002684_020 Hb_021596_020--Hb_002684_020 Hb_016448_010 Hb_016448_010 Hb_021596_020--Hb_016448_010 Hb_021596_020--Hb_000748_090 Hb_006438_020 Hb_006438_020 Hb_021596_020--Hb_006438_020 Hb_012633_050 Hb_012633_050 Hb_021596_020--Hb_012633_050 Hb_000562_070 Hb_000562_070 Hb_001279_020--Hb_000562_070 Hb_029552_020 Hb_029552_020 Hb_001279_020--Hb_029552_020 Hb_001053_080 Hb_001053_080 Hb_001279_020--Hb_001053_080 Hb_001279_090 Hb_001279_090 Hb_001279_020--Hb_001279_090 Hb_001279_020--Hb_000529_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.09477 4.575 9.63061 4.86704 2.2829 2.39362
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.4522 1.51558 1.22869 4.41817 7.23279

CAGE analysis