Hb_003160_020

Information

Type -
Description -
Location Contig3160: 13623-20196
Sequence    

Annotation

kegg
ID rcu:RCOM_0926520
description hypothetical protein
nr
ID XP_012078927.1
description PREDICTED: uncharacterized protein LOC105639457 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K889
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13232 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003160_020 0.0 - - PREDICTED: uncharacterized protein LOC105639457 [Jatropha curcas]
2 Hb_001507_100 0.153759729 - - cytochrome P450, putative [Ricinus communis]
3 Hb_004242_190 0.176805666 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
4 Hb_001104_240 0.1773701898 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
5 Hb_002972_020 0.1858754342 - - PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Jatropha curcas]
6 Hb_002028_220 0.1948448033 - - aminoadipic semialdehyde synthase, putative [Ricinus communis]
7 Hb_028872_060 0.1960177291 - - PREDICTED: ankyrin-3-like [Jatropha curcas]
8 Hb_006586_030 0.2005983182 - - PREDICTED: transcription factor LHW isoform X1 [Jatropha curcas]
9 Hb_146868_010 0.205352423 - - -
10 Hb_138585_110 0.2091149799 - - -
11 Hb_002407_080 0.2102669014 - - hypothetical protein JCGZ_00752 [Jatropha curcas]
12 Hb_111198_020 0.2130287338 - - hypothetical protein JCGZ_06907 [Jatropha curcas]
13 Hb_089497_010 0.2149742703 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like isoform X3 [Jatropha curcas]
14 Hb_112023_010 0.2154839271 - - hypothetical protein EUGRSUZ_C03826 [Eucalyptus grandis]
15 Hb_001472_120 0.2221334596 - - -
16 Hb_011512_090 0.2235472883 - - Hydroxyethylthiazole kinase, putative [Ricinus communis]
17 Hb_002400_400 0.2237241384 - - PREDICTED: topless-related protein 1-like isoform X3 [Jatropha curcas]
18 Hb_001524_090 0.2241415306 - - PREDICTED: uncharacterized protein LOC105113929 [Populus euphratica]
19 Hb_001369_440 0.2243124987 - - PREDICTED: BAG family molecular chaperone regulator 7 [Jatropha curcas]
20 Hb_001587_010 0.2250127778 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH25-like [Jatropha curcas]

Gene co-expression network

sample Hb_003160_020 Hb_003160_020 Hb_001507_100 Hb_001507_100 Hb_003160_020--Hb_001507_100 Hb_004242_190 Hb_004242_190 Hb_003160_020--Hb_004242_190 Hb_001104_240 Hb_001104_240 Hb_003160_020--Hb_001104_240 Hb_002972_020 Hb_002972_020 Hb_003160_020--Hb_002972_020 Hb_002028_220 Hb_002028_220 Hb_003160_020--Hb_002028_220 Hb_028872_060 Hb_028872_060 Hb_003160_020--Hb_028872_060 Hb_001507_100--Hb_001104_240 Hb_089497_010 Hb_089497_010 Hb_001507_100--Hb_089497_010 Hb_138585_110 Hb_138585_110 Hb_001507_100--Hb_138585_110 Hb_001507_100--Hb_004242_190 Hb_112023_010 Hb_112023_010 Hb_001507_100--Hb_112023_010 Hb_001258_060 Hb_001258_060 Hb_004242_190--Hb_001258_060 Hb_004242_190--Hb_028872_060 Hb_000805_320 Hb_000805_320 Hb_004242_190--Hb_000805_320 Hb_006816_200 Hb_006816_200 Hb_004242_190--Hb_006816_200 Hb_002407_080 Hb_002407_080 Hb_004242_190--Hb_002407_080 Hb_003120_030 Hb_003120_030 Hb_004242_190--Hb_003120_030 Hb_006586_030 Hb_006586_030 Hb_001104_240--Hb_006586_030 Hb_000086_660 Hb_000086_660 Hb_001104_240--Hb_000086_660 Hb_001269_690 Hb_001269_690 Hb_001104_240--Hb_001269_690 Hb_002827_020 Hb_002827_020 Hb_001104_240--Hb_002827_020 Hb_001529_050 Hb_001529_050 Hb_001104_240--Hb_001529_050 Hb_000200_280 Hb_000200_280 Hb_001104_240--Hb_000200_280 Hb_011512_090 Hb_011512_090 Hb_002972_020--Hb_011512_090 Hb_001427_070 Hb_001427_070 Hb_002972_020--Hb_001427_070 Hb_001089_040 Hb_001089_040 Hb_002972_020--Hb_001089_040 Hb_001009_080 Hb_001009_080 Hb_002972_020--Hb_001009_080 Hb_001232_010 Hb_001232_010 Hb_002972_020--Hb_001232_010 Hb_000140_480 Hb_000140_480 Hb_002972_020--Hb_000140_480 Hb_004230_040 Hb_004230_040 Hb_002028_220--Hb_004230_040 Hb_003044_030 Hb_003044_030 Hb_002028_220--Hb_003044_030 Hb_001472_120 Hb_001472_120 Hb_002028_220--Hb_001472_120 Hb_000252_170 Hb_000252_170 Hb_002028_220--Hb_000252_170 Hb_002391_270 Hb_002391_270 Hb_002028_220--Hb_002391_270 Hb_002028_220--Hb_006816_200 Hb_001150_040 Hb_001150_040 Hb_028872_060--Hb_001150_040 Hb_028872_060--Hb_004230_040 Hb_000640_300 Hb_000640_300 Hb_028872_060--Hb_000640_300 Hb_000009_620 Hb_000009_620 Hb_028872_060--Hb_000009_620 Hb_155123_010 Hb_155123_010 Hb_028872_060--Hb_155123_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.575248 0.504448 0.167533 0.313545 0.802934 0.924917
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.831602 0.547837 0.144791 2.23128 0

CAGE analysis