Hb_000140_480

Information

Type -
Description -
Location Contig140: 487400-488487
Sequence    

Annotation

kegg
ID rcu:RCOM_0126130
description 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, putative (EC:4.1.2.20)
nr
ID XP_012076183.1
description PREDICTED: uncharacterized protein LOC105637350 [Jatropha curcas]
swissprot
ID Q0TFJ7
description 2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=rhmA PE=3 SV=1
trembl
ID A0A067KPY9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11243 PE=4 SV=1
Gene Ontology
ID GO:0003824
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000140_480 0.0 - - PREDICTED: uncharacterized protein LOC105637350 [Jatropha curcas]
2 Hb_001427_070 0.0711553875 - - PREDICTED: xaa-Pro dipeptidase [Jatropha curcas]
3 Hb_000152_660 0.0758571249 - - PREDICTED: BAG family molecular chaperone regulator 7 [Jatropha curcas]
4 Hb_000739_100 0.089128687 - - ku P80 DNA helicase, putative [Ricinus communis]
5 Hb_001761_130 0.0893496673 - - PREDICTED: uncharacterized protein LOC105646118 isoform X1 [Jatropha curcas]
6 Hb_000347_440 0.0917811756 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 1 protein [Jatropha curcas]
7 Hb_000856_310 0.0963447928 - - PREDICTED: hypersensitive-induced response protein 1 [Jatropha curcas]
8 Hb_006831_040 0.0977738417 - - PREDICTED: enhancer of mRNA-decapping protein 4-like isoform X1 [Jatropha curcas]
9 Hb_001232_010 0.0993529501 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
10 Hb_001178_070 0.0996487053 - - PREDICTED: BTB/POZ domain-containing protein FBL11 [Jatropha curcas]
11 Hb_001021_080 0.0998749288 - - PREDICTED: autophagy-related protein 18a [Jatropha curcas]
12 Hb_002391_210 0.1000871929 - - PREDICTED: putative F-box protein At1g65770 [Jatropha curcas]
13 Hb_005000_260 0.1001882341 - - recA family protein [Populus trichocarpa]
14 Hb_000200_120 0.1025611958 - - PREDICTED: probable fructose-bisphosphate aldolase 3, chloroplastic [Jatropha curcas]
15 Hb_001157_090 0.103322502 - - PREDICTED: E3 ubiquitin-protein ligase SINAT2-like [Jatropha curcas]
16 Hb_000116_410 0.1042371454 - - hypothetical protein JCGZ_22416 [Jatropha curcas]
17 Hb_001018_050 0.1048846556 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]
18 Hb_002344_060 0.1053107386 - - PREDICTED: methylthioribose-1-phosphate isomerase [Jatropha curcas]
19 Hb_001840_090 0.106250229 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
20 Hb_002693_060 0.1063189221 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000140_480 Hb_000140_480 Hb_001427_070 Hb_001427_070 Hb_000140_480--Hb_001427_070 Hb_000152_660 Hb_000152_660 Hb_000140_480--Hb_000152_660 Hb_000739_100 Hb_000739_100 Hb_000140_480--Hb_000739_100 Hb_001761_130 Hb_001761_130 Hb_000140_480--Hb_001761_130 Hb_000347_440 Hb_000347_440 Hb_000140_480--Hb_000347_440 Hb_000856_310 Hb_000856_310 Hb_000140_480--Hb_000856_310 Hb_001427_070--Hb_001761_130 Hb_001427_070--Hb_000152_660 Hb_006831_040 Hb_006831_040 Hb_001427_070--Hb_006831_040 Hb_002391_210 Hb_002391_210 Hb_001427_070--Hb_002391_210 Hb_002110_030 Hb_002110_030 Hb_001427_070--Hb_002110_030 Hb_001018_050 Hb_001018_050 Hb_000152_660--Hb_001018_050 Hb_002344_060 Hb_002344_060 Hb_000152_660--Hb_002344_060 Hb_001157_090 Hb_001157_090 Hb_000152_660--Hb_001157_090 Hb_000152_660--Hb_000739_100 Hb_000152_660--Hb_002391_210 Hb_000739_100--Hb_001157_090 Hb_002900_090 Hb_002900_090 Hb_000739_100--Hb_002900_090 Hb_005000_260 Hb_005000_260 Hb_000739_100--Hb_005000_260 Hb_000703_150 Hb_000703_150 Hb_000739_100--Hb_000703_150 Hb_006922_010 Hb_006922_010 Hb_000739_100--Hb_006922_010 Hb_002686_030 Hb_002686_030 Hb_000739_100--Hb_002686_030 Hb_172632_110 Hb_172632_110 Hb_001761_130--Hb_172632_110 Hb_001761_130--Hb_006831_040 Hb_017358_040 Hb_017358_040 Hb_001761_130--Hb_017358_040 Hb_002477_090 Hb_002477_090 Hb_001761_130--Hb_002477_090 Hb_001232_010 Hb_001232_010 Hb_001761_130--Hb_001232_010 Hb_010174_110 Hb_010174_110 Hb_001761_130--Hb_010174_110 Hb_006913_010 Hb_006913_010 Hb_000347_440--Hb_006913_010 Hb_004109_310 Hb_004109_310 Hb_000347_440--Hb_004109_310 Hb_000023_280 Hb_000023_280 Hb_000347_440--Hb_000023_280 Hb_000252_200 Hb_000252_200 Hb_000347_440--Hb_000252_200 Hb_000676_190 Hb_000676_190 Hb_000347_440--Hb_000676_190 Hb_000244_220 Hb_000244_220 Hb_000856_310--Hb_000244_220 Hb_004602_040 Hb_004602_040 Hb_000856_310--Hb_004602_040 Hb_005214_090 Hb_005214_090 Hb_000856_310--Hb_005214_090 Hb_000369_130 Hb_000369_130 Hb_000856_310--Hb_000369_130 Hb_017862_020 Hb_017862_020 Hb_000856_310--Hb_017862_020 Hb_000856_310--Hb_000739_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.0095 18.2471 6.05313 13.6908 13.0304 13.9475
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.3779 11.3643 12.5032 29.5487 6.13694

CAGE analysis