Hb_001427_070

Information

Type -
Description -
Location Contig1427: 78405-85865
Sequence    

Annotation

kegg
ID rcu:RCOM_1048120
description xaa-pro dipeptidase, putative (EC:3.4.13.9)
nr
ID XP_012076793.1
description PREDICTED: xaa-Pro dipeptidase [Jatropha curcas]
swissprot
ID Q5RFB3
description Xaa-Pro dipeptidase OS=Pongo abelii GN=PEPD PE=2 SV=1
trembl
ID A0A067KFK4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07314 PE=4 SV=1
Gene Ontology
ID GO:0004177
description metallopeptidase m24 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001427_070 0.0 - - PREDICTED: xaa-Pro dipeptidase [Jatropha curcas]
2 Hb_000140_480 0.0711553875 - - PREDICTED: uncharacterized protein LOC105637350 [Jatropha curcas]
3 Hb_001761_130 0.099328178 - - PREDICTED: uncharacterized protein LOC105646118 isoform X1 [Jatropha curcas]
4 Hb_000152_660 0.0998937121 - - PREDICTED: BAG family molecular chaperone regulator 7 [Jatropha curcas]
5 Hb_006831_040 0.1002946896 - - PREDICTED: enhancer of mRNA-decapping protein 4-like isoform X1 [Jatropha curcas]
6 Hb_002391_210 0.1017427316 - - PREDICTED: putative F-box protein At1g65770 [Jatropha curcas]
7 Hb_002110_030 0.1077572267 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
8 Hb_002693_060 0.1110869124 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
9 Hb_172632_110 0.1120115568 - - PREDICTED: pumilio homolog 5 [Jatropha curcas]
10 Hb_134469_010 0.1124543434 - - PREDICTED: protein argonaute 5 isoform X1 [Jatropha curcas]
11 Hb_001021_080 0.1134072292 - - PREDICTED: autophagy-related protein 18a [Jatropha curcas]
12 Hb_000684_290 0.1153530458 - - ubiquitin protein ligase E3a, putative [Ricinus communis]
13 Hb_002972_020 0.1184480427 - - PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Jatropha curcas]
14 Hb_011716_090 0.1193845572 transcription factor TF Family: HRT putative transciption factor family protein [Populus trichocarpa]
15 Hb_001232_010 0.1197936188 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
16 Hb_008864_090 0.1210462342 - - PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
17 Hb_001269_140 0.121154315 - - PREDICTED: nuclear pore complex protein NUP96 [Jatropha curcas]
18 Hb_000739_100 0.1211722489 - - ku P80 DNA helicase, putative [Ricinus communis]
19 Hb_000856_310 0.121947138 - - PREDICTED: hypersensitive-induced response protein 1 [Jatropha curcas]
20 Hb_011512_090 0.1220740083 - - Hydroxyethylthiazole kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001427_070 Hb_001427_070 Hb_000140_480 Hb_000140_480 Hb_001427_070--Hb_000140_480 Hb_001761_130 Hb_001761_130 Hb_001427_070--Hb_001761_130 Hb_000152_660 Hb_000152_660 Hb_001427_070--Hb_000152_660 Hb_006831_040 Hb_006831_040 Hb_001427_070--Hb_006831_040 Hb_002391_210 Hb_002391_210 Hb_001427_070--Hb_002391_210 Hb_002110_030 Hb_002110_030 Hb_001427_070--Hb_002110_030 Hb_000140_480--Hb_000152_660 Hb_000739_100 Hb_000739_100 Hb_000140_480--Hb_000739_100 Hb_000140_480--Hb_001761_130 Hb_000347_440 Hb_000347_440 Hb_000140_480--Hb_000347_440 Hb_000856_310 Hb_000856_310 Hb_000140_480--Hb_000856_310 Hb_172632_110 Hb_172632_110 Hb_001761_130--Hb_172632_110 Hb_001761_130--Hb_006831_040 Hb_017358_040 Hb_017358_040 Hb_001761_130--Hb_017358_040 Hb_002477_090 Hb_002477_090 Hb_001761_130--Hb_002477_090 Hb_001232_010 Hb_001232_010 Hb_001761_130--Hb_001232_010 Hb_010174_110 Hb_010174_110 Hb_001761_130--Hb_010174_110 Hb_001018_050 Hb_001018_050 Hb_000152_660--Hb_001018_050 Hb_002344_060 Hb_002344_060 Hb_000152_660--Hb_002344_060 Hb_001157_090 Hb_001157_090 Hb_000152_660--Hb_001157_090 Hb_000152_660--Hb_000739_100 Hb_000152_660--Hb_002391_210 Hb_006831_040--Hb_172632_110 Hb_006831_040--Hb_010174_110 Hb_002740_110 Hb_002740_110 Hb_006831_040--Hb_002740_110 Hb_004994_220 Hb_004994_220 Hb_006831_040--Hb_004994_220 Hb_004117_310 Hb_004117_310 Hb_006831_040--Hb_004117_310 Hb_002391_210--Hb_172632_110 Hb_002400_410 Hb_002400_410 Hb_002391_210--Hb_002400_410 Hb_002391_210--Hb_001761_130 Hb_007747_080 Hb_007747_080 Hb_002391_210--Hb_007747_080 Hb_001021_080 Hb_001021_080 Hb_002391_210--Hb_001021_080 Hb_005081_020 Hb_005081_020 Hb_002391_210--Hb_005081_020 Hb_002110_030--Hb_006831_040 Hb_001019_180 Hb_001019_180 Hb_002110_030--Hb_001019_180 Hb_073562_010 Hb_073562_010 Hb_002110_030--Hb_073562_010 Hb_000330_040 Hb_000330_040 Hb_002110_030--Hb_000330_040 Hb_011512_090 Hb_011512_090 Hb_002110_030--Hb_011512_090 Hb_001575_010 Hb_001575_010 Hb_002110_030--Hb_001575_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
28.1364 38.5323 9.36142 22.262 24.8781 27.7099
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.2445 13.8725 28.1631 68.6763 12.7952

CAGE analysis