Hb_001507_100

Information

Type -
Description -
Location Contig1507: 63488-86523
Sequence    

Annotation

kegg
ID rcu:RCOM_0785370
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID XP_002523235.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9LVD2
description Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1
trembl
ID B9SB66
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0785370 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 71b34-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001507_100 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_003160_020 0.153759729 - - PREDICTED: uncharacterized protein LOC105639457 [Jatropha curcas]
3 Hb_001104_240 0.161730802 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
4 Hb_089497_010 0.1658322632 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like isoform X3 [Jatropha curcas]
5 Hb_138585_110 0.1704424055 - - -
6 Hb_004242_190 0.1840951432 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
7 Hb_112023_010 0.1873886437 - - hypothetical protein EUGRSUZ_C03826 [Eucalyptus grandis]
8 Hb_001529_050 0.1890965033 - - PREDICTED: ribulose bisphosphate carboxylase small chain clone 512-like [Jatropha curcas]
9 Hb_006586_030 0.1944963863 - - PREDICTED: transcription factor LHW isoform X1 [Jatropha curcas]
10 Hb_000109_240 0.1952258805 - - PREDICTED: uncharacterized protein LOC102615432 [Citrus sinensis]
11 Hb_004788_040 0.1971339469 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_000828_040 0.200868492 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
13 Hb_002400_400 0.2052320071 - - PREDICTED: topless-related protein 1-like isoform X3 [Jatropha curcas]
14 Hb_006111_080 0.2064078177 - - hypothetical protein JCGZ_18070 [Jatropha curcas]
15 Hb_028872_060 0.210381302 - - PREDICTED: ankyrin-3-like [Jatropha curcas]
16 Hb_004230_040 0.2132023736 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000640_300 0.2132447957 transcription factor TF Family: WRKY WRKY1 [Hevea brasiliensis]
18 Hb_001150_040 0.2153034134 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Solanum lycopersicum]
19 Hb_009780_080 0.2176033961 - - PREDICTED: valine--tRNA ligase, mitochondrial isoform X2 [Jatropha curcas]
20 Hb_001269_690 0.2195331256 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001507_100 Hb_001507_100 Hb_003160_020 Hb_003160_020 Hb_001507_100--Hb_003160_020 Hb_001104_240 Hb_001104_240 Hb_001507_100--Hb_001104_240 Hb_089497_010 Hb_089497_010 Hb_001507_100--Hb_089497_010 Hb_138585_110 Hb_138585_110 Hb_001507_100--Hb_138585_110 Hb_004242_190 Hb_004242_190 Hb_001507_100--Hb_004242_190 Hb_112023_010 Hb_112023_010 Hb_001507_100--Hb_112023_010 Hb_003160_020--Hb_004242_190 Hb_003160_020--Hb_001104_240 Hb_002972_020 Hb_002972_020 Hb_003160_020--Hb_002972_020 Hb_002028_220 Hb_002028_220 Hb_003160_020--Hb_002028_220 Hb_028872_060 Hb_028872_060 Hb_003160_020--Hb_028872_060 Hb_006586_030 Hb_006586_030 Hb_001104_240--Hb_006586_030 Hb_000086_660 Hb_000086_660 Hb_001104_240--Hb_000086_660 Hb_001269_690 Hb_001269_690 Hb_001104_240--Hb_001269_690 Hb_002827_020 Hb_002827_020 Hb_001104_240--Hb_002827_020 Hb_001529_050 Hb_001529_050 Hb_001104_240--Hb_001529_050 Hb_000200_280 Hb_000200_280 Hb_001104_240--Hb_000200_280 Hb_111198_020 Hb_111198_020 Hb_089497_010--Hb_111198_020 Hb_089497_010--Hb_112023_010 Hb_002400_400 Hb_002400_400 Hb_089497_010--Hb_002400_400 Hb_004136_040 Hb_004136_040 Hb_089497_010--Hb_004136_040 Hb_166236_010 Hb_166236_010 Hb_089497_010--Hb_166236_010 Hb_004355_030 Hb_004355_030 Hb_089497_010--Hb_004355_030 Hb_000796_250 Hb_000796_250 Hb_138585_110--Hb_000796_250 Hb_138585_110--Hb_001529_050 Hb_004230_040 Hb_004230_040 Hb_138585_110--Hb_004230_040 Hb_138585_110--Hb_001104_240 Hb_010334_020 Hb_010334_020 Hb_138585_110--Hb_010334_020 Hb_001258_060 Hb_001258_060 Hb_004242_190--Hb_001258_060 Hb_004242_190--Hb_028872_060 Hb_000805_320 Hb_000805_320 Hb_004242_190--Hb_000805_320 Hb_006816_200 Hb_006816_200 Hb_004242_190--Hb_006816_200 Hb_002407_080 Hb_002407_080 Hb_004242_190--Hb_002407_080 Hb_003120_030 Hb_003120_030 Hb_004242_190--Hb_003120_030 Hb_001514_130 Hb_001514_130 Hb_112023_010--Hb_001514_130 Hb_004586_280 Hb_004586_280 Hb_112023_010--Hb_004586_280 Hb_112023_010--Hb_111198_020 Hb_000227_060 Hb_000227_060 Hb_112023_010--Hb_000227_060 Hb_112023_010--Hb_000200_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.29085 1.0172 0.173329 0.227228 0.638008 0.833067
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.53176 0.625913 0.222861 3.06247 0.0663173

CAGE analysis