Hb_155123_010

Information

Type -
Description -
Location Contig155123: 2410-2835
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012072612.1
description PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_155123_010 0.0 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
2 Hb_008376_010 0.1800921407 - - -
3 Hb_018133_120 0.1820357394 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
4 Hb_028872_060 0.187689764 - - PREDICTED: ankyrin-3-like [Jatropha curcas]
5 Hb_004738_020 0.1877359013 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001856_010 0.1930801989 - - DNA binding protein, putative [Ricinus communis]
7 Hb_004116_200 0.1993034251 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
8 Hb_031403_010 0.2024814136 - - hypothetical protein POPTR_0001s40140g [Populus trichocarpa]
9 Hb_001514_190 0.2025093946 - - -
10 Hb_000116_480 0.2026205741 - - PREDICTED: MORC family CW-type zinc finger protein 3-like [Jatropha curcas]
11 Hb_011472_040 0.205024183 - - PREDICTED: clathrin light chain 3 [Jatropha curcas]
12 Hb_000050_100 0.2056981265 - - PREDICTED: homeobox protein knotted-1-like 2 [Jatropha curcas]
13 Hb_017987_090 0.2096579286 transcription factor TF Family: HB PREDICTED: homeobox protein knotted-1-like 2 [Jatropha curcas]
14 Hb_000976_010 0.2105775332 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 4 [Jatropha curcas]
15 Hb_001817_180 0.2115088763 - - PREDICTED: RING-H2 finger protein ATL47 [Jatropha curcas]
16 Hb_000138_040 0.2128494979 - - PREDICTED: uncharacterized protein LOC105646531 [Jatropha curcas]
17 Hb_004225_180 0.2161638156 - - bel1 homeotic protein, putative [Ricinus communis]
18 Hb_000009_620 0.2165582445 - - zinc finger protein, putative [Ricinus communis]
19 Hb_019973_030 0.2169024005 - - -
20 Hb_000027_270 0.2172033105 - - PREDICTED: zinc finger protein 6 [Jatropha curcas]

Gene co-expression network

sample Hb_155123_010 Hb_155123_010 Hb_008376_010 Hb_008376_010 Hb_155123_010--Hb_008376_010 Hb_018133_120 Hb_018133_120 Hb_155123_010--Hb_018133_120 Hb_028872_060 Hb_028872_060 Hb_155123_010--Hb_028872_060 Hb_004738_020 Hb_004738_020 Hb_155123_010--Hb_004738_020 Hb_001856_010 Hb_001856_010 Hb_155123_010--Hb_001856_010 Hb_004116_200 Hb_004116_200 Hb_155123_010--Hb_004116_200 Hb_019973_030 Hb_019973_030 Hb_008376_010--Hb_019973_030 Hb_000014_100 Hb_000014_100 Hb_008376_010--Hb_000014_100 Hb_003125_050 Hb_003125_050 Hb_008376_010--Hb_003125_050 Hb_019153_040 Hb_019153_040 Hb_008376_010--Hb_019153_040 Hb_000958_010 Hb_000958_010 Hb_008376_010--Hb_000958_010 Hb_001514_190 Hb_001514_190 Hb_008376_010--Hb_001514_190 Hb_001186_060 Hb_001186_060 Hb_018133_120--Hb_001186_060 Hb_005214_110 Hb_005214_110 Hb_018133_120--Hb_005214_110 Hb_001158_030 Hb_001158_030 Hb_018133_120--Hb_001158_030 Hb_011716_040 Hb_011716_040 Hb_018133_120--Hb_011716_040 Hb_011671_330 Hb_011671_330 Hb_018133_120--Hb_011671_330 Hb_000371_110 Hb_000371_110 Hb_018133_120--Hb_000371_110 Hb_001150_040 Hb_001150_040 Hb_028872_060--Hb_001150_040 Hb_004242_190 Hb_004242_190 Hb_028872_060--Hb_004242_190 Hb_004230_040 Hb_004230_040 Hb_028872_060--Hb_004230_040 Hb_000640_300 Hb_000640_300 Hb_028872_060--Hb_000640_300 Hb_000009_620 Hb_000009_620 Hb_028872_060--Hb_000009_620 Hb_004738_020--Hb_001150_040 Hb_004225_180 Hb_004225_180 Hb_004738_020--Hb_004225_180 Hb_004738_020--Hb_000640_300 Hb_000703_240 Hb_000703_240 Hb_004738_020--Hb_000703_240 Hb_001959_040 Hb_001959_040 Hb_004738_020--Hb_001959_040 Hb_002391_230 Hb_002391_230 Hb_001856_010--Hb_002391_230 Hb_001856_010--Hb_000009_620 Hb_000134_350 Hb_000134_350 Hb_001856_010--Hb_000134_350 Hb_001856_010--Hb_004738_020 Hb_001856_010--Hb_001514_190 Hb_002045_130 Hb_002045_130 Hb_004116_200--Hb_002045_130 Hb_003750_080 Hb_003750_080 Hb_004116_200--Hb_003750_080 Hb_163145_020 Hb_163145_020 Hb_004116_200--Hb_163145_020 Hb_000635_220 Hb_000635_220 Hb_004116_200--Hb_000635_220 Hb_001500_040 Hb_001500_040 Hb_004116_200--Hb_001500_040 Hb_001856_020 Hb_001856_020 Hb_004116_200--Hb_001856_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.374891 0.326374 0 0 0.797837 0.543755
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.708382 0.278199 0.680359 0.589531 0

CAGE analysis