Hb_002045_130

Information

Type transcription factor
Description TF Family: bZIP
Location Contig2045: 88485-95456
Sequence    

Annotation

kegg
ID rcu:RCOM_0991570
description DNA binding protein, putative
nr
ID XP_012092128.1
description PREDICTED: light-inducible protein CPRF2 [Jatropha curcas]
swissprot
ID Q99090
description Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2
trembl
ID A0A067JC43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21848 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002045_130 0.0 transcription factor TF Family: bZIP PREDICTED: light-inducible protein CPRF2 [Jatropha curcas]
2 Hb_000189_640 0.1189509034 - - PREDICTED: probable RNA helicase SDE3 [Jatropha curcas]
3 Hb_004116_200 0.1342799148 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
4 Hb_000365_020 0.1384693426 - - Vacuolar sorting receptor 1 precursor, putative [Ricinus communis]
5 Hb_003893_010 0.1526259869 - - hypothetical protein M569_16374 [Genlisea aurea]
6 Hb_001500_040 0.1603830673 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial isoform X2 [Jatropha curcas]
7 Hb_002489_010 0.166377474 - - hypothetical protein JCGZ_17199 [Jatropha curcas]
8 Hb_176681_010 0.1688604119 - - PREDICTED: probable RNA helicase SDE3 [Populus euphratica]
9 Hb_006065_010 0.1693245005 - - PREDICTED: uncharacterized protein LOC105639733 [Jatropha curcas]
10 Hb_001897_040 0.1693560365 - - 26S proteasome non-atpase regulatory subunit, putative [Ricinus communis]
11 Hb_002842_020 0.1710673798 - - Prolactin regulatory element-binding protein, putative [Ricinus communis]
12 Hb_129910_010 0.1745367516 - - PREDICTED: F-box-like/WD repeat-containing protein TBL1X [Populus euphratica]
13 Hb_001959_210 0.1750943272 - - PREDICTED: uncharacterized protein LOC105638438 [Jatropha curcas]
14 Hb_001811_030 0.1772530594 - - Beta-ureidopropionase, putative [Ricinus communis]
15 Hb_000482_090 0.1778370493 - - PREDICTED: uncharacterized protein LOC105638145 [Jatropha curcas]
16 Hb_000340_390 0.1780578721 - - PREDICTED: autophagy-related protein 18g [Jatropha curcas]
17 Hb_002835_410 0.178150022 - - clathrin coat assembly protein ap-1, putative [Ricinus communis]
18 Hb_000049_310 0.1792672121 - - Myosin-J heavy chain, partial [Glycine soja]
19 Hb_000602_010 0.1797082157 - - PREDICTED: rhomboid-like protease 2 isoform X1 [Jatropha curcas]
20 Hb_003475_010 0.1810667025 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]

Gene co-expression network

sample Hb_002045_130 Hb_002045_130 Hb_000189_640 Hb_000189_640 Hb_002045_130--Hb_000189_640 Hb_004116_200 Hb_004116_200 Hb_002045_130--Hb_004116_200 Hb_000365_020 Hb_000365_020 Hb_002045_130--Hb_000365_020 Hb_003893_010 Hb_003893_010 Hb_002045_130--Hb_003893_010 Hb_001500_040 Hb_001500_040 Hb_002045_130--Hb_001500_040 Hb_002489_010 Hb_002489_010 Hb_002045_130--Hb_002489_010 Hb_002842_020 Hb_002842_020 Hb_000189_640--Hb_002842_020 Hb_000189_640--Hb_003893_010 Hb_000617_260 Hb_000617_260 Hb_000189_640--Hb_000617_260 Hb_000291_110 Hb_000291_110 Hb_000189_640--Hb_000291_110 Hb_000602_010 Hb_000602_010 Hb_000189_640--Hb_000602_010 Hb_003750_080 Hb_003750_080 Hb_004116_200--Hb_003750_080 Hb_163145_020 Hb_163145_020 Hb_004116_200--Hb_163145_020 Hb_000635_220 Hb_000635_220 Hb_004116_200--Hb_000635_220 Hb_004116_200--Hb_001500_040 Hb_001856_020 Hb_001856_020 Hb_004116_200--Hb_001856_020 Hb_000898_040 Hb_000898_040 Hb_000365_020--Hb_000898_040 Hb_004046_020 Hb_004046_020 Hb_000365_020--Hb_004046_020 Hb_002217_300 Hb_002217_300 Hb_000365_020--Hb_002217_300 Hb_001344_010 Hb_001344_010 Hb_000365_020--Hb_001344_010 Hb_000169_090 Hb_000169_090 Hb_000365_020--Hb_000169_090 Hb_005548_010 Hb_005548_010 Hb_000365_020--Hb_005548_010 Hb_001959_210 Hb_001959_210 Hb_003893_010--Hb_001959_210 Hb_000200_050 Hb_000200_050 Hb_003893_010--Hb_000200_050 Hb_000483_200 Hb_000483_200 Hb_003893_010--Hb_000483_200 Hb_003893_010--Hb_001500_040 Hb_003893_010--Hb_000602_010 Hb_006400_060 Hb_006400_060 Hb_001500_040--Hb_006400_060 Hb_001269_550 Hb_001269_550 Hb_001500_040--Hb_001269_550 Hb_001500_040--Hb_001959_210 Hb_002016_110 Hb_002016_110 Hb_001500_040--Hb_002016_110 Hb_001500_040--Hb_000483_200 Hb_006915_050 Hb_006915_050 Hb_001500_040--Hb_006915_050 Hb_006816_170 Hb_006816_170 Hb_002489_010--Hb_006816_170 Hb_024505_050 Hb_024505_050 Hb_002489_010--Hb_024505_050 Hb_000792_070 Hb_000792_070 Hb_002489_010--Hb_000792_070 Hb_002489_010--Hb_004116_200 Hb_002489_010--Hb_003893_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.211878 0.15565 0.0807504 0.217426 0.841562 0.30945
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.543461 0.374095 1.00115 0.71537 0.167173

CAGE analysis