Hb_004225_180

Information

Type -
Description -
Location Contig4225: 189817-196093
Sequence    

Annotation

kegg
ID rcu:RCOM_0544830
description bel1 homeotic protein, putative
nr
ID XP_002529426.1
description bel1 homeotic protein, putative [Ricinus communis]
swissprot
ID Q9SJJ3
description BEL1-like homeodomain protein 8 OS=Arabidopsis thaliana GN=BLH8 PE=1 SV=1
trembl
ID B9STV7
description Bel1 homeotic protein, putative OS=Ricinus communis GN=RCOM_0544830 PE=4 SV=1
Gene Ontology
ID GO:0007389
description bel1-like homeodomain protein 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41830: 191172-195839
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004225_180 0.0 - - bel1 homeotic protein, putative [Ricinus communis]
2 Hb_026698_010 0.107380621 - - 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
3 Hb_010407_070 0.1150927821 - - hypothetical protein POPTR_0008s16750g [Populus trichocarpa]
4 Hb_006189_010 0.1392070582 - - -
5 Hb_011472_040 0.1469609505 - - PREDICTED: clathrin light chain 3 [Jatropha curcas]
6 Hb_007849_040 0.1472837587 - - PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like [Vitis vinifera]
7 Hb_003978_010 0.1474712717 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
8 Hb_180333_010 0.1537110127 - - -
9 Hb_004738_020 0.154359442 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004607_150 0.1552084175 - - PREDICTED: serine/threonine-protein kinase UCNL [Jatropha curcas]
11 Hb_012052_060 0.1565396135 - - hypothetical protein POPTR_0018s10190g [Populus trichocarpa]
12 Hb_001150_040 0.1627448194 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Solanum lycopersicum]
13 Hb_000203_180 0.1634182195 - - PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Jatropha curcas]
14 Hb_002263_010 0.1666243459 - - hypothetical protein CICLE_v10012259mg [Citrus clementina]
15 Hb_006452_030 0.1674300026 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
16 Hb_084934_010 0.17096191 - - hypothetical protein JCGZ_22225 [Jatropha curcas]
17 Hb_000116_230 0.171173329 - - -
18 Hb_030312_040 0.171702107 - - hypothetical protein JCGZ_04876 [Jatropha curcas]
19 Hb_017987_090 0.1717758011 transcription factor TF Family: HB PREDICTED: homeobox protein knotted-1-like 2 [Jatropha curcas]
20 Hb_008959_030 0.1730083741 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_004225_180 Hb_004225_180 Hb_026698_010 Hb_026698_010 Hb_004225_180--Hb_026698_010 Hb_010407_070 Hb_010407_070 Hb_004225_180--Hb_010407_070 Hb_006189_010 Hb_006189_010 Hb_004225_180--Hb_006189_010 Hb_011472_040 Hb_011472_040 Hb_004225_180--Hb_011472_040 Hb_007849_040 Hb_007849_040 Hb_004225_180--Hb_007849_040 Hb_003978_010 Hb_003978_010 Hb_004225_180--Hb_003978_010 Hb_026698_010--Hb_010407_070 Hb_000599_140 Hb_000599_140 Hb_026698_010--Hb_000599_140 Hb_017987_070 Hb_017987_070 Hb_026698_010--Hb_017987_070 Hb_000457_170 Hb_000457_170 Hb_026698_010--Hb_000457_170 Hb_004607_150 Hb_004607_150 Hb_026698_010--Hb_004607_150 Hb_000050_100 Hb_000050_100 Hb_010407_070--Hb_000050_100 Hb_000116_230 Hb_000116_230 Hb_010407_070--Hb_000116_230 Hb_010407_070--Hb_000599_140 Hb_010407_070--Hb_007849_040 Hb_084934_010 Hb_084934_010 Hb_006189_010--Hb_084934_010 Hb_180333_010 Hb_180333_010 Hb_006189_010--Hb_180333_010 Hb_006189_010--Hb_011472_040 Hb_006189_010--Hb_004607_150 Hb_001186_060 Hb_001186_060 Hb_006189_010--Hb_001186_060 Hb_157854_010 Hb_157854_010 Hb_006189_010--Hb_157854_010 Hb_011472_040--Hb_084934_010 Hb_001975_070 Hb_001975_070 Hb_011472_040--Hb_001975_070 Hb_030312_040 Hb_030312_040 Hb_011472_040--Hb_030312_040 Hb_001655_070 Hb_001655_070 Hb_011472_040--Hb_001655_070 Hb_012052_060 Hb_012052_060 Hb_011472_040--Hb_012052_060 Hb_017987_090 Hb_017987_090 Hb_007849_040--Hb_017987_090 Hb_000567_200 Hb_000567_200 Hb_007849_040--Hb_000567_200 Hb_007849_040--Hb_001186_060 Hb_007849_040--Hb_003978_010 Hb_001195_100 Hb_001195_100 Hb_007849_040--Hb_001195_100 Hb_000033_050 Hb_000033_050 Hb_007849_040--Hb_000033_050 Hb_003978_010--Hb_011472_040 Hb_003978_010--Hb_001975_070 Hb_003978_010--Hb_001195_100 Hb_003978_010--Hb_010407_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
38.6896 30.2682 0.818943 1.07322 17.1547 35.7027
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
45.6357 20.9534 25.0296 21.076 0.225311

CAGE analysis