Hb_000457_170

Information

Type -
Description -
Location Contig457: 211543-212472
Sequence    

Annotation

kegg
ID rcu:RCOM_1679020
description hypothetical protein
nr
ID XP_012070985.1
description PREDICTED: uncharacterized protein LOC105633066 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LD67
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10167 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43471: 213343-213839
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000457_170 0.0 - - PREDICTED: uncharacterized protein LOC105633066 [Jatropha curcas]
2 Hb_000261_490 0.1348344017 - - PREDICTED: cyclin-dependent kinase inhibitor 5 [Jatropha curcas]
3 Hb_005843_100 0.1392784406 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39350-like [Jatropha curcas]
4 Hb_026698_010 0.1457564313 - - 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
5 Hb_005396_050 0.1605839369 - - PREDICTED: phosphoenolpyruvate carboxylase 4 [Jatropha curcas]
6 Hb_146464_010 0.1640929431 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]
7 Hb_000497_180 0.1672634728 - - hypothetical protein POPTR_0001s12710g [Populus trichocarpa]
8 Hb_001318_030 0.1675692104 - - PREDICTED: uncharacterized protein LOC105642686 [Jatropha curcas]
9 Hb_005843_150 0.1681490183 transcription factor TF Family: HSF PREDICTED: heat shock factor protein HSF24 [Jatropha curcas]
10 Hb_000237_080 0.1695551165 transcription factor TF Family: PHD PREDICTED: chromatin structure-remodeling complex subunit RSC1 [Jatropha curcas]
11 Hb_006582_020 0.1724933033 - - Zinc finger protein ZFPM1 [Theobroma cacao]
12 Hb_164945_040 0.1728953115 - - PREDICTED: uncharacterized protein LOC105628261 [Jatropha curcas]
13 Hb_005551_060 0.1732238547 - - PREDICTED: uncharacterized protein LOC105635819 [Jatropha curcas]
14 Hb_001541_270 0.1734337466 - - PREDICTED: uncharacterized protein LOC105644666 [Jatropha curcas]
15 Hb_169325_010 0.1777808882 - - PREDICTED: uncharacterized protein LOC103699787, partial [Phoenix dactylifera]
16 Hb_004607_150 0.1817110692 - - PREDICTED: serine/threonine-protein kinase UCNL [Jatropha curcas]
17 Hb_000016_100 0.1822683187 transcription factor TF Family: TCP PREDICTED: transcription factor TCP19 [Jatropha curcas]
18 Hb_010407_070 0.1827508757 - - hypothetical protein POPTR_0008s16750g [Populus trichocarpa]
19 Hb_000703_240 0.1839419642 - - -
20 Hb_004032_270 0.1849842866 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]

Gene co-expression network

sample Hb_000457_170 Hb_000457_170 Hb_000261_490 Hb_000261_490 Hb_000457_170--Hb_000261_490 Hb_005843_100 Hb_005843_100 Hb_000457_170--Hb_005843_100 Hb_026698_010 Hb_026698_010 Hb_000457_170--Hb_026698_010 Hb_005396_050 Hb_005396_050 Hb_000457_170--Hb_005396_050 Hb_146464_010 Hb_146464_010 Hb_000457_170--Hb_146464_010 Hb_000497_180 Hb_000497_180 Hb_000457_170--Hb_000497_180 Hb_000042_030 Hb_000042_030 Hb_000261_490--Hb_000042_030 Hb_000078_180 Hb_000078_180 Hb_000261_490--Hb_000078_180 Hb_001318_030 Hb_001318_030 Hb_000261_490--Hb_001318_030 Hb_003929_260 Hb_003929_260 Hb_000261_490--Hb_003929_260 Hb_000261_490--Hb_005843_100 Hb_002813_050 Hb_002813_050 Hb_005843_100--Hb_002813_050 Hb_005843_100--Hb_001318_030 Hb_096224_040 Hb_096224_040 Hb_005843_100--Hb_096224_040 Hb_005843_150 Hb_005843_150 Hb_005843_100--Hb_005843_150 Hb_012395_220 Hb_012395_220 Hb_005843_100--Hb_012395_220 Hb_002374_310 Hb_002374_310 Hb_005843_100--Hb_002374_310 Hb_010407_070 Hb_010407_070 Hb_026698_010--Hb_010407_070 Hb_004225_180 Hb_004225_180 Hb_026698_010--Hb_004225_180 Hb_000599_140 Hb_000599_140 Hb_026698_010--Hb_000599_140 Hb_017987_070 Hb_017987_070 Hb_026698_010--Hb_017987_070 Hb_004607_150 Hb_004607_150 Hb_026698_010--Hb_004607_150 Hb_156850_030 Hb_156850_030 Hb_005396_050--Hb_156850_030 Hb_000237_080 Hb_000237_080 Hb_005396_050--Hb_000237_080 Hb_001220_030 Hb_001220_030 Hb_005396_050--Hb_001220_030 Hb_004785_060 Hb_004785_060 Hb_005396_050--Hb_004785_060 Hb_005396_050--Hb_001318_030 Hb_000976_150 Hb_000976_150 Hb_005396_050--Hb_000976_150 Hb_005551_060 Hb_005551_060 Hb_146464_010--Hb_005551_060 Hb_001348_150 Hb_001348_150 Hb_146464_010--Hb_001348_150 Hb_001247_120 Hb_001247_120 Hb_146464_010--Hb_001247_120 Hb_006582_020 Hb_006582_020 Hb_146464_010--Hb_006582_020 Hb_004032_270 Hb_004032_270 Hb_146464_010--Hb_004032_270 Hb_001610_110 Hb_001610_110 Hb_146464_010--Hb_001610_110 Hb_000497_180--Hb_005843_150 Hb_000497_180--Hb_000237_080 Hb_000497_180--Hb_002813_050 Hb_000497_180--Hb_005843_100 Hb_000703_240 Hb_000703_240 Hb_000497_180--Hb_000703_240 Hb_000497_180--Hb_096224_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
28.9455 52.7773 1.29084 3.28819 12.2057 15.9264
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
32.6435 19.6907 24.3073 10.308 2.75369

CAGE analysis