Hb_000252_170

Information

Type -
Description -
Location Contig252: 140456-145963
Sequence    

Annotation

kegg
ID rcu:RCOM_0024530
description anthranilate phosphoribosyltransferase, putative
nr
ID XP_012085466.1
description PREDICTED: uncharacterized protein LOC105644650 isoform X2 [Jatropha curcas]
swissprot
ID O66576
description Anthranilate phosphoribosyltransferase OS=Aquifex aeolicus (strain VF5) GN=trpD PE=3 SV=1
trembl
ID A0A067K4D1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17802 PE=4 SV=1
Gene Ontology
ID GO:0016757
description anthranilate phosphoribosyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26364: 140670-145963 , PASA_asmbl_26365: 140670-141781
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000252_170 0.0 - - PREDICTED: uncharacterized protein LOC105644650 isoform X2 [Jatropha curcas]
2 Hb_000296_070 0.0682599963 - - hypothetical protein B456_003G048700 [Gossypium raimondii]
3 Hb_000123_210 0.075491782 - - PREDICTED: uncharacterized protein LOC105641576 isoform X2 [Jatropha curcas]
4 Hb_031340_050 0.0811704382 - - PREDICTED: tropinone reductase 1-like isoform X1 [Jatropha curcas]
5 Hb_000907_110 0.0862090487 - - dihydroxyacetone kinase family protein [Populus trichocarpa]
6 Hb_001357_250 0.0945348611 - - PREDICTED: UPF0505 protein C16orf62 homolog [Jatropha curcas]
7 Hb_000556_160 0.0966288352 - - PREDICTED: ankyrin repeat and zinc finger domain-containing protein 1 [Jatropha curcas]
8 Hb_000011_200 0.1015513416 - - PREDICTED: 26S protease regulatory subunit 7 isoform X1 [Jatropha curcas]
9 Hb_006788_020 0.1016538168 - - hypothetical protein JCGZ_21864 [Jatropha curcas]
10 Hb_004410_030 0.1020486225 - - PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic isoform X1 [Jatropha curcas]
11 Hb_000853_350 0.1025650962 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
12 Hb_000031_120 0.1026972216 - - PREDICTED: uncharacterized protein LOC105637488 [Jatropha curcas]
13 Hb_001157_090 0.1041125411 - - PREDICTED: E3 ubiquitin-protein ligase SINAT2-like [Jatropha curcas]
14 Hb_011218_040 0.1041585378 - - methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]
15 Hb_000329_470 0.1047381811 - - ccr4-not transcription complex, putative [Ricinus communis]
16 Hb_004954_070 0.1047451762 - - PREDICTED: uncharacterized protein LOC105645187 [Jatropha curcas]
17 Hb_007943_130 0.1052446116 - - 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
18 Hb_004994_220 0.1054305597 - - PREDICTED: K(+) efflux antiporter 2, chloroplastic-like isoform X2 [Jatropha curcas]
19 Hb_000225_040 0.1055381806 - - PREDICTED: translation factor GUF1 homolog, mitochondrial [Nelumbo nucifera]
20 Hb_001790_020 0.1060691408 - - PREDICTED: uncharacterized protein LOC105642165 [Jatropha curcas]

Gene co-expression network

sample Hb_000252_170 Hb_000252_170 Hb_000296_070 Hb_000296_070 Hb_000252_170--Hb_000296_070 Hb_000123_210 Hb_000123_210 Hb_000252_170--Hb_000123_210 Hb_031340_050 Hb_031340_050 Hb_000252_170--Hb_031340_050 Hb_000907_110 Hb_000907_110 Hb_000252_170--Hb_000907_110 Hb_001357_250 Hb_001357_250 Hb_000252_170--Hb_001357_250 Hb_000556_160 Hb_000556_160 Hb_000252_170--Hb_000556_160 Hb_007254_070 Hb_007254_070 Hb_000296_070--Hb_007254_070 Hb_002903_060 Hb_002903_060 Hb_000296_070--Hb_002903_060 Hb_000296_070--Hb_000123_210 Hb_000296_070--Hb_000907_110 Hb_120327_010 Hb_120327_010 Hb_000296_070--Hb_120327_010 Hb_001143_160 Hb_001143_160 Hb_000123_210--Hb_001143_160 Hb_000011_200 Hb_000011_200 Hb_000123_210--Hb_000011_200 Hb_000225_040 Hb_000225_040 Hb_000123_210--Hb_000225_040 Hb_000193_190 Hb_000193_190 Hb_000123_210--Hb_000193_190 Hb_006827_020 Hb_006827_020 Hb_000123_210--Hb_006827_020 Hb_123352_020 Hb_123352_020 Hb_000123_210--Hb_123352_020 Hb_000137_090 Hb_000137_090 Hb_031340_050--Hb_000137_090 Hb_031340_050--Hb_001357_250 Hb_002197_050 Hb_002197_050 Hb_031340_050--Hb_002197_050 Hb_001579_220 Hb_001579_220 Hb_031340_050--Hb_001579_220 Hb_023732_030 Hb_023732_030 Hb_031340_050--Hb_023732_030 Hb_000181_400 Hb_000181_400 Hb_000907_110--Hb_000181_400 Hb_033642_090 Hb_033642_090 Hb_000907_110--Hb_033642_090 Hb_000907_110--Hb_001357_250 Hb_028285_010 Hb_028285_010 Hb_000907_110--Hb_028285_010 Hb_004324_130 Hb_004324_130 Hb_000907_110--Hb_004324_130 Hb_000130_410 Hb_000130_410 Hb_000907_110--Hb_000130_410 Hb_001357_250--Hb_033642_090 Hb_004410_030 Hb_004410_030 Hb_001357_250--Hb_004410_030 Hb_000417_130 Hb_000417_130 Hb_001357_250--Hb_000417_130 Hb_123915_040 Hb_123915_040 Hb_001357_250--Hb_123915_040 Hb_063716_100 Hb_063716_100 Hb_001357_250--Hb_063716_100 Hb_002686_030 Hb_002686_030 Hb_000556_160--Hb_002686_030 Hb_001341_170 Hb_001341_170 Hb_000556_160--Hb_001341_170 Hb_004724_150 Hb_004724_150 Hb_000556_160--Hb_004724_150 Hb_002499_040 Hb_002499_040 Hb_000556_160--Hb_002499_040 Hb_003294_070 Hb_003294_070 Hb_000556_160--Hb_003294_070 Hb_000185_030 Hb_000185_030 Hb_000556_160--Hb_000185_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.61103 6.53176 4.21589 3.90697 9.8618 8.28908
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.64864 8.70657 7.89209 13.1985 3.34285

CAGE analysis