Hb_000123_210

Information

Type -
Description -
Location Contig123: 169076-171485
Sequence    

Annotation

kegg
ID tcc:TCM_042835
description Uncharacterized protein isoform 1
nr
ID XP_012081553.1
description PREDICTED: uncharacterized protein LOC105641576 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K150
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18432 PE=4 SV=1
Gene Ontology
ID GO:0016740
description n-lysine methyltransferase setd8-a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06975: 170849-189792
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000123_210 0.0 - - PREDICTED: uncharacterized protein LOC105641576 isoform X2 [Jatropha curcas]
2 Hb_001143_160 0.0560094565 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 isoform X2 [Jatropha curcas]
3 Hb_000011_200 0.0574629378 - - PREDICTED: 26S protease regulatory subunit 7 isoform X1 [Jatropha curcas]
4 Hb_000225_040 0.0614474666 - - PREDICTED: translation factor GUF1 homolog, mitochondrial [Nelumbo nucifera]
5 Hb_000193_190 0.0650671893 - - PREDICTED: dnaJ homolog subfamily C member 16 [Jatropha curcas]
6 Hb_006827_020 0.0684501076 - - conserved hypothetical protein [Ricinus communis]
7 Hb_123352_020 0.0696403975 - - PREDICTED: pentatricopeptide repeat-containing protein At5g65560 [Jatropha curcas]
8 Hb_004429_100 0.0704371623 - - PREDICTED: asparagine synthetase domain-containing protein 1 [Jatropha curcas]
9 Hb_001790_020 0.0721069956 - - PREDICTED: uncharacterized protein LOC105642165 [Jatropha curcas]
10 Hb_004994_220 0.0726191012 - - PREDICTED: K(+) efflux antiporter 2, chloroplastic-like isoform X2 [Jatropha curcas]
11 Hb_106371_010 0.0730967977 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
12 Hb_030116_020 0.0739409824 - - hypothetical protein POPTR_0016s13630g [Populus trichocarpa]
13 Hb_000252_170 0.075491782 - - PREDICTED: uncharacterized protein LOC105644650 isoform X2 [Jatropha curcas]
14 Hb_007943_130 0.0762520485 - - 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
15 Hb_003158_010 0.0769489435 - - hypothetical protein JCGZ_17361 [Jatropha curcas]
16 Hb_000700_140 0.0776341408 - - PREDICTED: guanine nucleotide-binding protein-like NSN1 [Jatropha curcas]
17 Hb_000629_010 0.0776411865 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 32 isoform X1 [Jatropha curcas]
18 Hb_004410_030 0.0778976303 - - PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_011218_040 0.078780801 - - methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]
20 Hb_001493_030 0.0802443265 - - hypothetical protein MIMGU_mgv1a005351mg [Erythranthe guttata]

Gene co-expression network

sample Hb_000123_210 Hb_000123_210 Hb_001143_160 Hb_001143_160 Hb_000123_210--Hb_001143_160 Hb_000011_200 Hb_000011_200 Hb_000123_210--Hb_000011_200 Hb_000225_040 Hb_000225_040 Hb_000123_210--Hb_000225_040 Hb_000193_190 Hb_000193_190 Hb_000123_210--Hb_000193_190 Hb_006827_020 Hb_006827_020 Hb_000123_210--Hb_006827_020 Hb_123352_020 Hb_123352_020 Hb_000123_210--Hb_123352_020 Hb_001143_160--Hb_123352_020 Hb_007163_090 Hb_007163_090 Hb_001143_160--Hb_007163_090 Hb_001143_160--Hb_000225_040 Hb_001493_030 Hb_001493_030 Hb_001143_160--Hb_001493_030 Hb_001143_160--Hb_000011_200 Hb_000011_200--Hb_000225_040 Hb_000011_200--Hb_000193_190 Hb_004410_030 Hb_004410_030 Hb_000011_200--Hb_004410_030 Hb_003158_010 Hb_003158_010 Hb_000011_200--Hb_003158_010 Hb_000011_200--Hb_006827_020 Hb_007317_110 Hb_007317_110 Hb_000011_200--Hb_007317_110 Hb_000225_040--Hb_003158_010 Hb_167498_010 Hb_167498_010 Hb_000225_040--Hb_167498_010 Hb_010618_010 Hb_010618_010 Hb_000225_040--Hb_010618_010 Hb_000225_040--Hb_000193_190 Hb_000329_470 Hb_000329_470 Hb_000225_040--Hb_000329_470 Hb_000205_100 Hb_000205_100 Hb_000193_190--Hb_000205_100 Hb_001946_010 Hb_001946_010 Hb_000193_190--Hb_001946_010 Hb_007576_110 Hb_007576_110 Hb_000193_190--Hb_007576_110 Hb_011930_160 Hb_011930_160 Hb_000193_190--Hb_011930_160 Hb_006827_020--Hb_007317_110 Hb_000808_270 Hb_000808_270 Hb_006827_020--Hb_000808_270 Hb_007059_010 Hb_007059_010 Hb_006827_020--Hb_007059_010 Hb_000538_100 Hb_000538_100 Hb_006827_020--Hb_000538_100 Hb_003813_130 Hb_003813_130 Hb_006827_020--Hb_003813_130 Hb_000487_290 Hb_000487_290 Hb_123352_020--Hb_000487_290 Hb_123352_020--Hb_007163_090 Hb_123352_020--Hb_000225_040 Hb_005731_030 Hb_005731_030 Hb_123352_020--Hb_005731_030 Hb_000457_260 Hb_000457_260 Hb_123352_020--Hb_000457_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.38589 7.39396 4.38244 5.9125 11.5043 11.9018
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.05392 7.6809 9.55234 12.5211 4.40468

CAGE analysis