Hb_120327_010

Information

Type -
Description -
Location Contig120327: 142-2935
Sequence    

Annotation

kegg
ID tcc:TCM_040287
description Casein kinase I protein isoform 1
nr
ID XP_012093319.1
description PREDICTED: uncharacterized protein LOC105650959 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L797
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19188 PE=3 SV=1
Gene Ontology
ID GO:0004674
description kinase family protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120327_010 0.0 - - PREDICTED: uncharacterized protein LOC105650959 [Jatropha curcas]
2 Hb_000827_070 0.0633001245 desease resistance Gene Name: NB-ARC PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
3 Hb_007254_070 0.0645037059 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Jatropha curcas]
4 Hb_044728_010 0.0661136006 - - -
5 Hb_004800_080 0.0665918823 - - PREDICTED: acidic leucine-rich nuclear phosphoprotein 32-related protein [Jatropha curcas]
6 Hb_000225_040 0.0688534752 - - PREDICTED: translation factor GUF1 homolog, mitochondrial [Nelumbo nucifera]
7 Hb_000107_330 0.0716390938 - - PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Jatropha curcas]
8 Hb_001341_170 0.0734432426 - - PREDICTED: general transcription factor IIH subunit 2 [Jatropha curcas]
9 Hb_000487_290 0.0742612944 - - ribonucleic acid binding protein S1, putative [Ricinus communis]
10 Hb_123352_020 0.0745709894 - - PREDICTED: pentatricopeptide repeat-containing protein At5g65560 [Jatropha curcas]
11 Hb_003464_060 0.074636127 - - PREDICTED: F-box protein PP2-A15 [Jatropha curcas]
12 Hb_005731_030 0.0750814816 - - PREDICTED: UPF0400 protein C337.03 [Jatropha curcas]
13 Hb_010618_010 0.0762003431 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
14 Hb_000556_160 0.0763075499 - - PREDICTED: ankyrin repeat and zinc finger domain-containing protein 1 [Jatropha curcas]
15 Hb_167498_010 0.0764799669 - - PREDICTED: WPP domain-interacting protein 1-like [Jatropha curcas]
16 Hb_000096_070 0.0776539769 - - PREDICTED: ruvB-like 2 [Jatropha curcas]
17 Hb_008500_010 0.0791789767 - - PREDICTED: pentatricopeptide repeat-containing protein At2g17210 [Jatropha curcas]
18 Hb_000577_010 0.0797304513 - - hypothetical protein JCGZ_23887 [Jatropha curcas]
19 Hb_005188_050 0.0801198056 - - PREDICTED: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial isoform X1 [Jatropha curcas]
20 Hb_002686_030 0.0802383302 - - PREDICTED: uncharacterized protein LOC105632635 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_120327_010 Hb_120327_010 Hb_000827_070 Hb_000827_070 Hb_120327_010--Hb_000827_070 Hb_007254_070 Hb_007254_070 Hb_120327_010--Hb_007254_070 Hb_044728_010 Hb_044728_010 Hb_120327_010--Hb_044728_010 Hb_004800_080 Hb_004800_080 Hb_120327_010--Hb_004800_080 Hb_000225_040 Hb_000225_040 Hb_120327_010--Hb_000225_040 Hb_000107_330 Hb_000107_330 Hb_120327_010--Hb_000107_330 Hb_005188_050 Hb_005188_050 Hb_000827_070--Hb_005188_050 Hb_045793_010 Hb_045793_010 Hb_000827_070--Hb_045793_010 Hb_000487_290 Hb_000487_290 Hb_000827_070--Hb_000487_290 Hb_002477_030 Hb_002477_030 Hb_000827_070--Hb_002477_030 Hb_001736_040 Hb_001736_040 Hb_000827_070--Hb_001736_040 Hb_167498_010 Hb_167498_010 Hb_007254_070--Hb_167498_010 Hb_004355_020 Hb_004355_020 Hb_007254_070--Hb_004355_020 Hb_002903_060 Hb_002903_060 Hb_007254_070--Hb_002903_060 Hb_000395_130 Hb_000395_130 Hb_007254_070--Hb_000395_130 Hb_003158_010 Hb_003158_010 Hb_007254_070--Hb_003158_010 Hb_009767_110 Hb_009767_110 Hb_044728_010--Hb_009767_110 Hb_044728_010--Hb_000107_330 Hb_000092_170 Hb_000092_170 Hb_044728_010--Hb_000092_170 Hb_044728_010--Hb_000225_040 Hb_001675_180 Hb_001675_180 Hb_044728_010--Hb_001675_180 Hb_010618_010 Hb_010618_010 Hb_044728_010--Hb_010618_010 Hb_008554_130 Hb_008554_130 Hb_004800_080--Hb_008554_130 Hb_004800_080--Hb_167498_010 Hb_002391_310 Hb_002391_310 Hb_004800_080--Hb_002391_310 Hb_004800_080--Hb_007254_070 Hb_001369_730 Hb_001369_730 Hb_004800_080--Hb_001369_730 Hb_000011_200 Hb_000011_200 Hb_000225_040--Hb_000011_200 Hb_000225_040--Hb_003158_010 Hb_000225_040--Hb_167498_010 Hb_000225_040--Hb_010618_010 Hb_000193_190 Hb_000193_190 Hb_000225_040--Hb_000193_190 Hb_000329_470 Hb_000329_470 Hb_000225_040--Hb_000329_470 Hb_000107_330--Hb_000092_170 Hb_000107_330--Hb_009767_110 Hb_000085_050 Hb_000085_050 Hb_000107_330--Hb_000085_050 Hb_003525_010 Hb_003525_010 Hb_000107_330--Hb_003525_010 Hb_000025_640 Hb_000025_640 Hb_000107_330--Hb_000025_640
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.58 26.0549 10.7411 11.5955 27.4341 32.0146
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.2341 29.4016 28.9694 24.2049 16.7272

CAGE analysis