Hb_001486_020

Information

Type -
Description -
Location Contig1486: 21152-21397
Sequence    

Annotation

kegg
ID rcu:RCOM_1121510
description hypothetical protein
nr
ID KDP39699.1
description hypothetical protein JCGZ_02719 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L6L5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02719 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001486_020 0.0 - - hypothetical protein JCGZ_02719 [Jatropha curcas]
2 Hb_089140_120 0.1436385157 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
3 Hb_001221_220 0.1472287648 - - PREDICTED: deoxycytidylate deaminase isoform X1 [Jatropha curcas]
4 Hb_102291_010 0.157121285 - - PREDICTED: histone chaperone ASF1B [Populus euphratica]
5 Hb_009545_090 0.1585106381 - - hypothetical protein JCGZ_02186 [Jatropha curcas]
6 Hb_001911_040 0.1591661687 - - PREDICTED: uncharacterized protein LOC105628407 [Jatropha curcas]
7 Hb_000991_040 0.1609163422 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
8 Hb_003746_030 0.161356072 - - PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Jatropha curcas]
9 Hb_000282_030 0.1631610181 - - K(+) efflux antiporter 4 [Glycine soja]
10 Hb_073171_090 0.1666114228 - - PREDICTED: uncharacterized protein LOC105631539 [Jatropha curcas]
11 Hb_008232_030 0.1678752599 - - -
12 Hb_000186_330 0.1679665169 - - PREDICTED: uncharacterized protein LOC105650086 [Jatropha curcas]
13 Hb_003835_090 0.169258767 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Jatropha curcas]
14 Hb_002615_070 0.171980759 - - PREDICTED: uncharacterized protein LOC105628992 isoform X1 [Jatropha curcas]
15 Hb_003097_120 0.1727829308 - - PREDICTED: cytokinin dehydrogenase 6 [Jatropha curcas]
16 Hb_002869_050 0.1732309742 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
17 Hb_000122_050 0.1732528984 - - conserved hypothetical protein [Ricinus communis]
18 Hb_010789_020 0.1744304007 - - ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
19 Hb_000589_060 0.1744606722 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00699 [Jatropha curcas]
20 Hb_007403_110 0.1748859057 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like [Jatropha curcas]

Gene co-expression network

sample Hb_001486_020 Hb_001486_020 Hb_089140_120 Hb_089140_120 Hb_001486_020--Hb_089140_120 Hb_001221_220 Hb_001221_220 Hb_001486_020--Hb_001221_220 Hb_102291_010 Hb_102291_010 Hb_001486_020--Hb_102291_010 Hb_009545_090 Hb_009545_090 Hb_001486_020--Hb_009545_090 Hb_001911_040 Hb_001911_040 Hb_001486_020--Hb_001911_040 Hb_000991_040 Hb_000991_040 Hb_001486_020--Hb_000991_040 Hb_010789_020 Hb_010789_020 Hb_089140_120--Hb_010789_020 Hb_000438_090 Hb_000438_090 Hb_089140_120--Hb_000438_090 Hb_000743_030 Hb_000743_030 Hb_089140_120--Hb_000743_030 Hb_089140_120--Hb_001911_040 Hb_010053_040 Hb_010053_040 Hb_089140_120--Hb_010053_040 Hb_005867_090 Hb_005867_090 Hb_001221_220--Hb_005867_090 Hb_000538_240 Hb_000538_240 Hb_001221_220--Hb_000538_240 Hb_007943_050 Hb_007943_050 Hb_001221_220--Hb_007943_050 Hb_156635_010 Hb_156635_010 Hb_001221_220--Hb_156635_010 Hb_000733_200 Hb_000733_200 Hb_001221_220--Hb_000733_200 Hb_003567_030 Hb_003567_030 Hb_001221_220--Hb_003567_030 Hb_002235_210 Hb_002235_210 Hb_102291_010--Hb_002235_210 Hb_005306_160 Hb_005306_160 Hb_102291_010--Hb_005306_160 Hb_003746_030 Hb_003746_030 Hb_102291_010--Hb_003746_030 Hb_014361_150 Hb_014361_150 Hb_102291_010--Hb_014361_150 Hb_003371_150 Hb_003371_150 Hb_102291_010--Hb_003371_150 Hb_000309_040 Hb_000309_040 Hb_102291_010--Hb_000309_040 Hb_005015_080 Hb_005015_080 Hb_009545_090--Hb_005015_080 Hb_009545_090--Hb_007943_050 Hb_002232_480 Hb_002232_480 Hb_009545_090--Hb_002232_480 Hb_002869_050 Hb_002869_050 Hb_009545_090--Hb_002869_050 Hb_003925_040 Hb_003925_040 Hb_009545_090--Hb_003925_040 Hb_002553_040 Hb_002553_040 Hb_009545_090--Hb_002553_040 Hb_011671_480 Hb_011671_480 Hb_001911_040--Hb_011671_480 Hb_001911_040--Hb_009545_090 Hb_001911_040--Hb_000538_240 Hb_001911_040--Hb_000743_030 Hb_001829_040 Hb_001829_040 Hb_001911_040--Hb_001829_040 Hb_000357_110 Hb_000357_110 Hb_001911_040--Hb_000357_110 Hb_000622_340 Hb_000622_340 Hb_000991_040--Hb_000622_340 Hb_000260_600 Hb_000260_600 Hb_000991_040--Hb_000260_600 Hb_000815_240 Hb_000815_240 Hb_000991_040--Hb_000815_240 Hb_008937_010 Hb_008937_010 Hb_000991_040--Hb_008937_010 Hb_000390_250 Hb_000390_250 Hb_000991_040--Hb_000390_250 Hb_000322_070 Hb_000322_070 Hb_000991_040--Hb_000322_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
35.9028 85.0603 65.6158 86.8478 35.4829 40.5888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.7838 39.2818 21.0838 10.5787 4.22501

CAGE analysis