Hb_089140_120

Information

Type -
Description -
Location Contig89140: 78501-80823
Sequence    

Annotation

kegg
ID rcu:RCOM_0712120
description Maintenance of ploidy protein mob1, putative
nr
ID XP_012077038.1
description PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
swissprot
ID Q949G5
description MOB kinase activator-like 1A OS=Medicago sativa subsp. falcata GN=MOB1-A PE=2 SV=2
trembl
ID A0A067KQ08
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07480 PE=4 SV=1
Gene Ontology
ID GO:0005856
description mob kinase activator-like 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61685: 78443-79051
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089140_120 0.0 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
2 Hb_010789_020 0.1405236354 - - ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
3 Hb_000438_090 0.1410681364 - - PREDICTED: mini-chromosome maintenance complex-binding protein [Jatropha curcas]
4 Hb_001486_020 0.1436385157 - - hypothetical protein JCGZ_02719 [Jatropha curcas]
5 Hb_000743_030 0.1608447667 - - NmrA-like negative transcriptional regulator family protein [Theobroma cacao]
6 Hb_001911_040 0.1626505549 - - PREDICTED: uncharacterized protein LOC105628407 [Jatropha curcas]
7 Hb_010053_040 0.1660308522 - - PREDICTED: ras-related protein Rab11D [Jatropha curcas]
8 Hb_001829_040 0.1679192422 - - PREDICTED: protein transport protein SEC13 homolog B [Jatropha curcas]
9 Hb_008232_030 0.1686128944 - - -
10 Hb_003305_030 0.168724185 - - -
11 Hb_001545_050 0.1701030047 - - PREDICTED: ras-related protein Rab7 [Nicotiana sylvestris]
12 Hb_011671_480 0.1751526922 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006570_150 0.1764815077 - - PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
14 Hb_000245_080 0.1776346136 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-15 [Jatropha curcas]
15 Hb_009393_200 0.1787680466 - - PREDICTED: F-box only protein 13 [Jatropha curcas]
16 Hb_001722_050 0.1817968504 - - calcium binding family protein [Populus trichocarpa]
17 Hb_000302_130 0.1825747985 - - PREDICTED: trafficking protein particle complex subunit 1 [Jatropha curcas]
18 Hb_002869_050 0.183966204 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
19 Hb_130613_010 0.1842152822 - - Charged multivesicular body protein 2a, putative [Ricinus communis]
20 Hb_000538_240 0.184462593 - - PREDICTED: uncharacterized protein LOC105643073 [Jatropha curcas]

Gene co-expression network

sample Hb_089140_120 Hb_089140_120 Hb_010789_020 Hb_010789_020 Hb_089140_120--Hb_010789_020 Hb_000438_090 Hb_000438_090 Hb_089140_120--Hb_000438_090 Hb_001486_020 Hb_001486_020 Hb_089140_120--Hb_001486_020 Hb_000743_030 Hb_000743_030 Hb_089140_120--Hb_000743_030 Hb_001911_040 Hb_001911_040 Hb_089140_120--Hb_001911_040 Hb_010053_040 Hb_010053_040 Hb_089140_120--Hb_010053_040 Hb_164945_010 Hb_164945_010 Hb_010789_020--Hb_164945_010 Hb_000580_100 Hb_000580_100 Hb_010789_020--Hb_000580_100 Hb_011671_480 Hb_011671_480 Hb_010789_020--Hb_011671_480 Hb_010381_010 Hb_010381_010 Hb_010789_020--Hb_010381_010 Hb_039021_010 Hb_039021_010 Hb_010789_020--Hb_039021_010 Hb_000622_200 Hb_000622_200 Hb_010789_020--Hb_000622_200 Hb_000438_090--Hb_164945_010 Hb_000438_090--Hb_010789_020 Hb_007163_060 Hb_007163_060 Hb_000438_090--Hb_007163_060 Hb_000320_050 Hb_000320_050 Hb_000438_090--Hb_000320_050 Hb_000122_010 Hb_000122_010 Hb_000438_090--Hb_000122_010 Hb_001221_220 Hb_001221_220 Hb_001486_020--Hb_001221_220 Hb_102291_010 Hb_102291_010 Hb_001486_020--Hb_102291_010 Hb_009545_090 Hb_009545_090 Hb_001486_020--Hb_009545_090 Hb_001486_020--Hb_001911_040 Hb_000991_040 Hb_000991_040 Hb_001486_020--Hb_000991_040 Hb_000743_030--Hb_001911_040 Hb_006570_150 Hb_006570_150 Hb_000743_030--Hb_006570_150 Hb_000743_030--Hb_001221_220 Hb_000538_240 Hb_000538_240 Hb_000743_030--Hb_000538_240 Hb_002631_280 Hb_002631_280 Hb_000743_030--Hb_002631_280 Hb_000422_030 Hb_000422_030 Hb_000743_030--Hb_000422_030 Hb_001911_040--Hb_011671_480 Hb_001911_040--Hb_009545_090 Hb_001911_040--Hb_000538_240 Hb_001829_040 Hb_001829_040 Hb_001911_040--Hb_001829_040 Hb_000357_110 Hb_000357_110 Hb_001911_040--Hb_000357_110 Hb_002965_040 Hb_002965_040 Hb_010053_040--Hb_002965_040 Hb_000735_050 Hb_000735_050 Hb_010053_040--Hb_000735_050 Hb_005000_320 Hb_005000_320 Hb_010053_040--Hb_005000_320 Hb_000637_140 Hb_000637_140 Hb_010053_040--Hb_000637_140 Hb_003038_120 Hb_003038_120 Hb_010053_040--Hb_003038_120 Hb_003891_070 Hb_003891_070 Hb_010053_040--Hb_003891_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.05925 1.17492 1.4358 2.42995 0.527936 0.779315
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.541397 0.922037 0.125376 0.289633 0.138855

CAGE analysis