Hb_006570_150

Information

Type -
Description -
Location Contig6570: 88546-90979
Sequence    

Annotation

kegg
ID rcu:RCOM_1597990
description hypothetical protein
nr
ID XP_012073797.1
description PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KLB3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08213 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52795: 88516-90945
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006570_150 0.0 - - PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
2 Hb_000115_080 0.0993897299 - - PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas]
3 Hb_002893_040 0.1023318767 - - PREDICTED: carbon catabolite repressor protein 4 homolog 6 isoform X1 [Jatropha curcas]
4 Hb_002965_040 0.1093153724 - - drought-responsive family protein [Populus trichocarpa]
5 Hb_001258_100 0.1095815872 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X1 [Jatropha curcas]
6 Hb_009545_090 0.1110466195 - - hypothetical protein JCGZ_02186 [Jatropha curcas]
7 Hb_002092_120 0.1133023006 - - PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Jatropha curcas]
8 Hb_000173_310 0.1140034923 - - PREDICTED: uncharacterized protein LOC105631893 isoform X1 [Jatropha curcas]
9 Hb_000352_350 0.1141306141 - - PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Jatropha curcas]
10 Hb_000422_030 0.1144821194 - - PREDICTED: uncharacterized protein LOC105643943 [Jatropha curcas]
11 Hb_006132_110 0.1166980646 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002553_040 0.1177068915 - - PREDICTED: transcription factor bHLH104 [Jatropha curcas]
13 Hb_002311_380 0.1225774234 - - PREDICTED: induced during hyphae development protein 1 [Jatropha curcas]
14 Hb_000522_150 0.1240380632 - - PREDICTED: uncharacterized protein LOC105646670 [Jatropha curcas]
15 Hb_003213_010 0.1240891235 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
16 Hb_158144_010 0.1244630764 - - -
17 Hb_000181_090 0.1251237531 - - PREDICTED: protein yippee-like At5g53940 [Jatropha curcas]
18 Hb_000743_030 0.1267595034 - - NmrA-like negative transcriptional regulator family protein [Theobroma cacao]
19 Hb_001776_210 0.1274335622 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
20 Hb_001951_200 0.12807493 - - PREDICTED: cold-regulated 413 inner membrane protein 1, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_006570_150 Hb_006570_150 Hb_000115_080 Hb_000115_080 Hb_006570_150--Hb_000115_080 Hb_002893_040 Hb_002893_040 Hb_006570_150--Hb_002893_040 Hb_002965_040 Hb_002965_040 Hb_006570_150--Hb_002965_040 Hb_001258_100 Hb_001258_100 Hb_006570_150--Hb_001258_100 Hb_009545_090 Hb_009545_090 Hb_006570_150--Hb_009545_090 Hb_002092_120 Hb_002092_120 Hb_006570_150--Hb_002092_120 Hb_002311_380 Hb_002311_380 Hb_000115_080--Hb_002311_380 Hb_003929_170 Hb_003929_170 Hb_000115_080--Hb_003929_170 Hb_001087_030 Hb_001087_030 Hb_000115_080--Hb_001087_030 Hb_059480_010 Hb_059480_010 Hb_000115_080--Hb_059480_010 Hb_001723_150 Hb_001723_150 Hb_000115_080--Hb_001723_150 Hb_002893_040--Hb_001258_100 Hb_002413_010 Hb_002413_010 Hb_002893_040--Hb_002413_010 Hb_001951_200 Hb_001951_200 Hb_002893_040--Hb_001951_200 Hb_001776_210 Hb_001776_210 Hb_002893_040--Hb_001776_210 Hb_002893_040--Hb_002092_120 Hb_002572_020 Hb_002572_020 Hb_002893_040--Hb_002572_020 Hb_000787_150 Hb_000787_150 Hb_002965_040--Hb_000787_150 Hb_003096_060 Hb_003096_060 Hb_002965_040--Hb_003096_060 Hb_002965_040--Hb_001258_100 Hb_000227_270 Hb_000227_270 Hb_002965_040--Hb_000227_270 Hb_000494_080 Hb_000494_080 Hb_002965_040--Hb_000494_080 Hb_000205_130 Hb_000205_130 Hb_002965_040--Hb_000205_130 Hb_003912_040 Hb_003912_040 Hb_001258_100--Hb_003912_040 Hb_001225_030 Hb_001225_030 Hb_001258_100--Hb_001225_030 Hb_001258_100--Hb_002413_010 Hb_001258_100--Hb_003096_060 Hb_007062_040 Hb_007062_040 Hb_001258_100--Hb_007062_040 Hb_005015_080 Hb_005015_080 Hb_009545_090--Hb_005015_080 Hb_007943_050 Hb_007943_050 Hb_009545_090--Hb_007943_050 Hb_002232_480 Hb_002232_480 Hb_009545_090--Hb_002232_480 Hb_002869_050 Hb_002869_050 Hb_009545_090--Hb_002869_050 Hb_003925_040 Hb_003925_040 Hb_009545_090--Hb_003925_040 Hb_002553_040 Hb_002553_040 Hb_009545_090--Hb_002553_040 Hb_008225_090 Hb_008225_090 Hb_002092_120--Hb_008225_090 Hb_000300_260 Hb_000300_260 Hb_002092_120--Hb_000300_260 Hb_000176_020 Hb_000176_020 Hb_002092_120--Hb_000176_020 Hb_002092_120--Hb_002572_020 Hb_000270_470 Hb_000270_470 Hb_002092_120--Hb_000270_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.55151 9.90487 12.7842 11.4916 5.1499 6.06772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.69365 8.06158 2.97456 2.55531 4.45167

CAGE analysis