Hb_005306_160

Information

Type -
Description -
Location Contig5306: 98611-101238
Sequence    

Annotation

kegg
ID cic:CICLE_v100256421m
description hypothetical protein
nr
ID XP_012068941.1
description PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
swissprot
ID Q9LTR9
description Glycylpeptide N-tetradecanoyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=2
trembl
ID A0A067KX98
description Glycylpeptide N-tetradecanoyltransferase OS=Jatropha curcas GN=JCGZ_24741 PE=3 SV=1
Gene Ontology
ID GO:0004379
description glycylpeptide n-tetradecanoyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47369: 98623-101239 , PASA_asmbl_47370: 98623-101239
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005306_160 0.0 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
2 Hb_000076_160 0.0530046307 - - PREDICTED: AP-5 complex subunit zeta-1 [Jatropha curcas]
3 Hb_002046_110 0.0668702375 - - PREDICTED: TBC1 domain family member 15 isoform X2 [Jatropha curcas]
4 Hb_000928_220 0.0741080995 - - PREDICTED: protein SCAI [Jatropha curcas]
5 Hb_000576_020 0.0757278046 - - PREDICTED: uncharacterized protein LOC105638286 [Jatropha curcas]
6 Hb_000070_080 0.0773924765 - - PREDICTED: uncharacterized protein LOC105645742 isoform X2 [Jatropha curcas]
7 Hb_000309_040 0.078625129 - - PREDICTED: protein farnesyltransferase subunit beta isoform X1 [Jatropha curcas]
8 Hb_001205_200 0.0792133252 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001135_120 0.0793260929 - - PREDICTED: TBC1 domain family member 10B-like isoform X1 [Jatropha curcas]
10 Hb_000358_230 0.0811916595 - - protein phosphatases pp1 regulatory subunit, putative [Ricinus communis]
11 Hb_009083_070 0.0812462553 - - PREDICTED: uncharacterized protein LOC105639870 [Jatropha curcas]
12 Hb_002325_040 0.0814311781 - - PREDICTED: uncharacterized protein LOC105645422 isoform X1 [Jatropha curcas]
13 Hb_000087_060 0.0818294656 - - protein transporter, putative [Ricinus communis]
14 Hb_003682_030 0.0824516902 - - hypothetical protein CICLE_v10020876mg [Citrus clementina]
15 Hb_014361_150 0.0825031345 - - PREDICTED: uncharacterized protein LOC105639827 [Jatropha curcas]
16 Hb_002078_220 0.0829370196 - - PREDICTED: CTD small phosphatase-like protein 2 isoform X1 [Jatropha curcas]
17 Hb_001751_140 0.0835649903 - - PREDICTED: uncharacterized protein LOC105648510 isoform X1 [Jatropha curcas]
18 Hb_032264_060 0.0836352913 - - hypothetical protein JCGZ_02506 [Jatropha curcas]
19 Hb_001247_130 0.0845767558 - - PREDICTED: shaggy-related protein kinase alpha [Jatropha curcas]
20 Hb_002477_250 0.0847209972 - - DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus communis]

Gene co-expression network

sample Hb_005306_160 Hb_005306_160 Hb_000076_160 Hb_000076_160 Hb_005306_160--Hb_000076_160 Hb_002046_110 Hb_002046_110 Hb_005306_160--Hb_002046_110 Hb_000928_220 Hb_000928_220 Hb_005306_160--Hb_000928_220 Hb_000576_020 Hb_000576_020 Hb_005306_160--Hb_000576_020 Hb_000070_080 Hb_000070_080 Hb_005306_160--Hb_000070_080 Hb_000309_040 Hb_000309_040 Hb_005306_160--Hb_000309_040 Hb_000076_160--Hb_000928_220 Hb_000679_310 Hb_000679_310 Hb_000076_160--Hb_000679_310 Hb_000358_230 Hb_000358_230 Hb_000076_160--Hb_000358_230 Hb_000087_060 Hb_000087_060 Hb_000076_160--Hb_000087_060 Hb_001751_140 Hb_001751_140 Hb_000076_160--Hb_001751_140 Hb_009083_070 Hb_009083_070 Hb_002046_110--Hb_009083_070 Hb_002325_040 Hb_002325_040 Hb_002046_110--Hb_002325_040 Hb_002046_110--Hb_000928_220 Hb_001135_120 Hb_001135_120 Hb_002046_110--Hb_001135_120 Hb_002046_110--Hb_000076_160 Hb_000402_080 Hb_000402_080 Hb_000928_220--Hb_000402_080 Hb_002876_130 Hb_002876_130 Hb_000928_220--Hb_002876_130 Hb_002078_110 Hb_002078_110 Hb_000928_220--Hb_002078_110 Hb_002835_230 Hb_002835_230 Hb_000928_220--Hb_002835_230 Hb_004631_180 Hb_004631_180 Hb_000576_020--Hb_004631_180 Hb_006916_040 Hb_006916_040 Hb_000576_020--Hb_006916_040 Hb_000576_020--Hb_000076_160 Hb_002311_070 Hb_002311_070 Hb_000576_020--Hb_002311_070 Hb_000576_020--Hb_000928_220 Hb_001077_030 Hb_001077_030 Hb_000576_020--Hb_001077_030 Hb_008511_090 Hb_008511_090 Hb_000070_080--Hb_008511_090 Hb_008103_060 Hb_008103_060 Hb_000070_080--Hb_008103_060 Hb_000479_220 Hb_000479_220 Hb_000070_080--Hb_000479_220 Hb_000162_280 Hb_000162_280 Hb_000070_080--Hb_000162_280 Hb_000070_080--Hb_002078_110 Hb_002078_220 Hb_002078_220 Hb_000070_080--Hb_002078_220 Hb_000309_040--Hb_002078_110 Hb_001051_080 Hb_001051_080 Hb_000309_040--Hb_001051_080 Hb_000309_040--Hb_000076_160 Hb_000309_040--Hb_001751_140 Hb_138596_010 Hb_138596_010 Hb_000309_040--Hb_138596_010 Hb_000309_040--Hb_002835_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.1932 20.0359 15.7251 14.9707 14.395 11.0647
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.83327 10.8582 10.3544 8.98873 5.92427

CAGE analysis