Hb_008511_090

Information

Type -
Description -
Location Contig8511: 95610-98877
Sequence    

Annotation

kegg
ID tcc:TCM_006896
description BTB/POZ domain-containing protein isoform 1
nr
ID XP_012069947.1
description PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Jatropha curcas]
swissprot
ID Q9CAJ9
description BTB/POZ domain-containing protein At1g63850 OS=Arabidopsis thaliana GN=At1g63850 PE=1 SV=1
trembl
ID A0A067LP54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10089 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60419: 95904-98863
cDNA
(Sanger)
(ID:Location)		 008_N09.ab1: 96606-98612 , 041_F12.ab1: 96606-98702

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008511_090 0.0 - - PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Jatropha curcas]
2 Hb_000070_080 0.0546352831 - - PREDICTED: uncharacterized protein LOC105645742 isoform X2 [Jatropha curcas]
3 Hb_004109_030 0.0564954549 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001005_190 0.0683903239 - - PREDICTED: UPF0496 protein At3g19330-like isoform X1 [Jatropha curcas]
5 Hb_007163_120 0.0684766295 - - PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas]
6 Hb_000479_220 0.070001607 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
7 Hb_002078_220 0.0708550707 - - PREDICTED: CTD small phosphatase-like protein 2 isoform X1 [Jatropha curcas]
8 Hb_011491_010 0.0724756868 - - Protein YME1, putative [Ricinus communis]
9 Hb_003082_010 0.0725381084 - - PREDICTED: putative F-box protein At3g10240 [Jatropha curcas]
10 Hb_012055_060 0.0729409845 - - PREDICTED: uncharacterized protein LOC105639799 isoform X1 [Jatropha curcas]
11 Hb_000366_120 0.0737809897 - - PREDICTED: chaperone protein dnaJ 49-like [Jatropha curcas]
12 Hb_014497_050 0.0744014847 transcription factor TF Family: bZIP hypothetical protein JCGZ_08021 [Jatropha curcas]
13 Hb_001864_060 0.074802597 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1-like [Jatropha curcas]
14 Hb_000331_670 0.0780311821 - - PREDICTED: protein tipD [Jatropha curcas]
15 Hb_013399_100 0.0781283507 - - conserved hypothetical protein [Ricinus communis]
16 Hb_020831_030 0.0782625651 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000886_050 0.0785324551 - - hypothetical protein POPTR_0003s01110g [Populus trichocarpa]
18 Hb_002043_140 0.0790005705 - - PREDICTED: uncharacterized protein At1g51745-like [Jatropha curcas]
19 Hb_009767_100 0.0811206975 - - PREDICTED: FRIGIDA-like protein 4a [Jatropha curcas]
20 Hb_003640_040 0.082382308 - - PREDICTED: uncharacterized protein LOC105647348 [Jatropha curcas]

Gene co-expression network

sample Hb_008511_090 Hb_008511_090 Hb_000070_080 Hb_000070_080 Hb_008511_090--Hb_000070_080 Hb_004109_030 Hb_004109_030 Hb_008511_090--Hb_004109_030 Hb_001005_190 Hb_001005_190 Hb_008511_090--Hb_001005_190 Hb_007163_120 Hb_007163_120 Hb_008511_090--Hb_007163_120 Hb_000479_220 Hb_000479_220 Hb_008511_090--Hb_000479_220 Hb_002078_220 Hb_002078_220 Hb_008511_090--Hb_002078_220 Hb_008103_060 Hb_008103_060 Hb_000070_080--Hb_008103_060 Hb_000070_080--Hb_000479_220 Hb_000162_280 Hb_000162_280 Hb_000070_080--Hb_000162_280 Hb_002078_110 Hb_002078_110 Hb_000070_080--Hb_002078_110 Hb_000070_080--Hb_002078_220 Hb_003082_010 Hb_003082_010 Hb_004109_030--Hb_003082_010 Hb_003373_040 Hb_003373_040 Hb_004109_030--Hb_003373_040 Hb_002890_090 Hb_002890_090 Hb_004109_030--Hb_002890_090 Hb_004109_030--Hb_000070_080 Hb_000941_130 Hb_000941_130 Hb_004109_030--Hb_000941_130 Hb_011491_010 Hb_011491_010 Hb_001005_190--Hb_011491_010 Hb_009767_100 Hb_009767_100 Hb_001005_190--Hb_009767_100 Hb_000538_270 Hb_000538_270 Hb_001005_190--Hb_000538_270 Hb_001005_190--Hb_007163_120 Hb_005288_010 Hb_005288_010 Hb_001005_190--Hb_005288_010 Hb_003464_090 Hb_003464_090 Hb_007163_120--Hb_003464_090 Hb_003370_030 Hb_003370_030 Hb_007163_120--Hb_003370_030 Hb_033772_030 Hb_033772_030 Hb_007163_120--Hb_033772_030 Hb_007163_120--Hb_011491_010 Hb_007765_110 Hb_007765_110 Hb_007163_120--Hb_007765_110 Hb_024621_040 Hb_024621_040 Hb_007163_120--Hb_024621_040 Hb_008253_030 Hb_008253_030 Hb_000479_220--Hb_008253_030 Hb_138596_010 Hb_138596_010 Hb_000479_220--Hb_138596_010 Hb_002615_090 Hb_002615_090 Hb_000479_220--Hb_002615_090 Hb_002253_080 Hb_002253_080 Hb_000479_220--Hb_002253_080 Hb_002843_120 Hb_002843_120 Hb_000479_220--Hb_002843_120 Hb_000886_050 Hb_000886_050 Hb_002078_220--Hb_000886_050 Hb_000076_160 Hb_000076_160 Hb_002078_220--Hb_000076_160 Hb_002078_220--Hb_008103_060 Hb_002876_130 Hb_002876_130 Hb_002078_220--Hb_002876_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
43.8917 59.6301 29.9093 33.4117 37.6872 40.3355
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
36.8035 31.6052 42.7633 31.6895 16.4022

CAGE analysis