Hb_008253_030

Information

Type -
Description -
Location Contig8253: 38480-43126
Sequence    

Annotation

kegg
ID rcu:RCOM_0530660
description hypothetical protein
nr
ID XP_012071244.1
description PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
swissprot
ID Q9LK21
description Probable carboxylesterase 11 OS=Arabidopsis thaliana GN=CXE11 PE=2 SV=1
trembl
ID A0A067LNC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10185 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59710: 39814-40049 , PASA_asmbl_59711: 42459-43059
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008253_030 0.0 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
2 Hb_001767_140 0.0406992877 - - PREDICTED: protein-tyrosine-phosphatase MKP1 [Jatropha curcas]
3 Hb_002253_080 0.0457947411 - - PREDICTED: phosphatidylinositol 4-kinase beta 1-like [Jatropha curcas]
4 Hb_002267_140 0.0480598746 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
5 Hb_001147_110 0.0565024109 - - PREDICTED: dynamin-2A-like [Jatropha curcas]
6 Hb_000479_220 0.0577914361 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
7 Hb_002276_240 0.0596119788 - - PREDICTED: uncharacterized protein LOC105640682 [Jatropha curcas]
8 Hb_000780_170 0.0606211513 - - PREDICTED: OBERON-like protein [Jatropha curcas]
9 Hb_002615_090 0.0627993876 - - PREDICTED: protein SMG7 isoform X1 [Jatropha curcas]
10 Hb_004129_070 0.0628121461 - - PREDICTED: conserved oligomeric Golgi complex subunit 5 [Jatropha curcas]
11 Hb_003866_080 0.0703655324 - - PREDICTED: uncharacterized protein LOC105639150 [Jatropha curcas]
12 Hb_001322_130 0.0704421472 - - PREDICTED: putative glycerol-3-phosphate transporter 4 [Jatropha curcas]
13 Hb_002235_300 0.0716417033 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280 isoform X1 [Jatropha curcas]
14 Hb_008253_020 0.0725958533 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
15 Hb_031042_050 0.0730326212 - - PREDICTED: protein transport protein SEC16B homolog [Jatropha curcas]
16 Hb_001268_280 0.0734211441 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001089_050 0.0734639867 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 4 [Jatropha curcas]
18 Hb_000174_060 0.0739778594 - - zinc finger family protein [Populus trichocarpa]
19 Hb_002085_030 0.0743343296 - - PREDICTED: protein CHROMATIN REMODELING 4 isoform X2 [Jatropha curcas]
20 Hb_000120_660 0.0744599918 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]

Gene co-expression network

sample Hb_008253_030 Hb_008253_030 Hb_001767_140 Hb_001767_140 Hb_008253_030--Hb_001767_140 Hb_002253_080 Hb_002253_080 Hb_008253_030--Hb_002253_080 Hb_002267_140 Hb_002267_140 Hb_008253_030--Hb_002267_140 Hb_001147_110 Hb_001147_110 Hb_008253_030--Hb_001147_110 Hb_000479_220 Hb_000479_220 Hb_008253_030--Hb_000479_220 Hb_002276_240 Hb_002276_240 Hb_008253_030--Hb_002276_240 Hb_001767_140--Hb_002253_080 Hb_001767_140--Hb_002267_140 Hb_140049_040 Hb_140049_040 Hb_001767_140--Hb_140049_040 Hb_000174_060 Hb_000174_060 Hb_001767_140--Hb_000174_060 Hb_003866_080 Hb_003866_080 Hb_001767_140--Hb_003866_080 Hb_001322_130 Hb_001322_130 Hb_002253_080--Hb_001322_130 Hb_031042_050 Hb_031042_050 Hb_002253_080--Hb_031042_050 Hb_002253_080--Hb_002267_140 Hb_002615_090 Hb_002615_090 Hb_002253_080--Hb_002615_090 Hb_138596_010 Hb_138596_010 Hb_002267_140--Hb_138596_010 Hb_002267_140--Hb_002276_240 Hb_002843_120 Hb_002843_120 Hb_002267_140--Hb_002843_120 Hb_000162_030 Hb_000162_030 Hb_001147_110--Hb_000162_030 Hb_001147_110--Hb_002276_240 Hb_001147_110--Hb_001767_140 Hb_184798_080 Hb_184798_080 Hb_001147_110--Hb_184798_080 Hb_002325_040 Hb_002325_040 Hb_001147_110--Hb_002325_040 Hb_000070_080 Hb_000070_080 Hb_000479_220--Hb_000070_080 Hb_000479_220--Hb_138596_010 Hb_000479_220--Hb_002615_090 Hb_000479_220--Hb_002253_080 Hb_000479_220--Hb_002843_120 Hb_004129_070 Hb_004129_070 Hb_002276_240--Hb_004129_070 Hb_009083_070 Hb_009083_070 Hb_002276_240--Hb_009083_070 Hb_002276_240--Hb_001767_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.1014 16.3491 8.81499 9.08548 9.70063 12.0669
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.78887 5.07386 7.88606 7.17818 8.57715

CAGE analysis