Hb_000907_180

Information

Type -
Description -
Location Contig907: 194375-196430
Sequence    

Annotation

kegg
ID rcu:RCOM_0287510
description hypothetical protein
nr
ID XP_012081283.1
description PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1L7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18399 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62067: 194442-196341
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000907_180 0.0 - - PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
2 Hb_003266_030 0.0787312454 - - hypothetical protein POPTR_0002s05550g [Populus trichocarpa]
3 Hb_004452_120 0.0835970821 - - PREDICTED: uncharacterized protein LOC105639574 [Jatropha curcas]
4 Hb_001882_010 0.0848460802 - - -
5 Hb_005127_030 0.0953809192 - - PREDICTED: tryptophan--tRNA ligase, mitochondrial isoform X2 [Jatropha curcas]
6 Hb_001022_030 0.0957131919 - - PREDICTED: sorting nexin 1 [Jatropha curcas]
7 Hb_012150_030 0.0958005742 - - PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas]
8 Hb_029351_010 0.0962825433 - - PREDICTED: HD domain-containing protein 2 isoform X1 [Jatropha curcas]
9 Hb_156850_100 0.0964808073 - - hypothetical protein CICLE_v10001788mg [Citrus clementina]
10 Hb_048093_010 0.0970845735 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
11 Hb_000061_180 0.1004032032 - - exonuclease, putative [Ricinus communis]
12 Hb_000086_080 0.100449079 - - conserved hypothetical protein [Ricinus communis]
13 Hb_021374_030 0.1004746951 - - hypothetical protein RCOM_0351490 [Ricinus communis]
14 Hb_000237_200 0.1011845254 - - PREDICTED: SUMO-activating enzyme subunit 2 [Jatropha curcas]
15 Hb_002006_150 0.1015792559 - - copine, putative [Ricinus communis]
16 Hb_000364_050 0.1027866141 - - PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Jatropha curcas]
17 Hb_000163_260 0.1031560943 - - PREDICTED: uncharacterized protein LOC105642518 [Jatropha curcas]
18 Hb_015099_030 0.1034321455 - - PREDICTED: uncharacterized protein LOC105649867 [Jatropha curcas]
19 Hb_012438_030 0.103622155 - - PREDICTED: protein sym-1 [Jatropha curcas]
20 Hb_003053_110 0.1049160022 - - PREDICTED: protease Do-like 1, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000907_180 Hb_000907_180 Hb_003266_030 Hb_003266_030 Hb_000907_180--Hb_003266_030 Hb_004452_120 Hb_004452_120 Hb_000907_180--Hb_004452_120 Hb_001882_010 Hb_001882_010 Hb_000907_180--Hb_001882_010 Hb_005127_030 Hb_005127_030 Hb_000907_180--Hb_005127_030 Hb_001022_030 Hb_001022_030 Hb_000907_180--Hb_001022_030 Hb_012150_030 Hb_012150_030 Hb_000907_180--Hb_012150_030 Hb_007904_230 Hb_007904_230 Hb_003266_030--Hb_007904_230 Hb_011671_260 Hb_011671_260 Hb_003266_030--Hb_011671_260 Hb_004965_110 Hb_004965_110 Hb_003266_030--Hb_004965_110 Hb_000086_080 Hb_000086_080 Hb_003266_030--Hb_000086_080 Hb_003411_090 Hb_003411_090 Hb_003266_030--Hb_003411_090 Hb_000926_080 Hb_000926_080 Hb_003266_030--Hb_000926_080 Hb_004452_120--Hb_012150_030 Hb_010863_050 Hb_010863_050 Hb_004452_120--Hb_010863_050 Hb_133702_010 Hb_133702_010 Hb_004452_120--Hb_133702_010 Hb_000364_050 Hb_000364_050 Hb_004452_120--Hb_000364_050 Hb_000061_180 Hb_000061_180 Hb_004452_120--Hb_000061_180 Hb_035273_020 Hb_035273_020 Hb_004452_120--Hb_035273_020 Hb_000163_260 Hb_000163_260 Hb_001882_010--Hb_000163_260 Hb_000291_180 Hb_000291_180 Hb_001882_010--Hb_000291_180 Hb_000029_400 Hb_000029_400 Hb_001882_010--Hb_000029_400 Hb_000007_090 Hb_000007_090 Hb_001882_010--Hb_000007_090 Hb_160271_010 Hb_160271_010 Hb_001882_010--Hb_160271_010 Hb_073973_090 Hb_073973_090 Hb_001882_010--Hb_073973_090 Hb_006538_120 Hb_006538_120 Hb_005127_030--Hb_006538_120 Hb_000221_140 Hb_000221_140 Hb_005127_030--Hb_000221_140 Hb_007534_050 Hb_007534_050 Hb_005127_030--Hb_007534_050 Hb_005731_160 Hb_005731_160 Hb_005127_030--Hb_005731_160 Hb_005127_030--Hb_012150_030 Hb_000212_440 Hb_000212_440 Hb_005127_030--Hb_000212_440 Hb_002874_180 Hb_002874_180 Hb_001022_030--Hb_002874_180 Hb_156850_100 Hb_156850_100 Hb_001022_030--Hb_156850_100 Hb_003728_100 Hb_003728_100 Hb_001022_030--Hb_003728_100 Hb_000539_050 Hb_000539_050 Hb_001022_030--Hb_000539_050 Hb_005539_010 Hb_005539_010 Hb_001022_030--Hb_005539_010 Hb_009225_020 Hb_009225_020 Hb_001022_030--Hb_009225_020 Hb_003053_110 Hb_003053_110 Hb_012150_030--Hb_003053_110 Hb_012150_030--Hb_010863_050 Hb_134849_010 Hb_134849_010 Hb_012150_030--Hb_134849_010 Hb_048093_010 Hb_048093_010 Hb_012150_030--Hb_048093_010 Hb_000941_100 Hb_000941_100 Hb_012150_030--Hb_000941_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.6342 11.2637 41.1952 27.3136 6.94602 19.7313
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.2447 17.8786 13.1958 19.45 34.2537

CAGE analysis