Hb_000803_250

Information

Type -
Description -
Location Contig803: 278952-284583
Sequence    

Annotation

kegg
ID rcu:RCOM_0854030
description hypothetical protein
nr
ID XP_012090055.1
description PREDICTED: uncharacterized protein LOC105648317 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JE39
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25962 PE=4 SV=1
Gene Ontology
ID GO:0005488
description dna-directed rna polymerase i subunit rpa1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000803_250 0.0 - - PREDICTED: uncharacterized protein LOC105648317 isoform X1 [Jatropha curcas]
2 Hb_078954_010 0.2265577197 - - hypothetical protein RCOM_0841800 [Ricinus communis]
3 Hb_025964_040 0.2545080843 - - PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Jatropha curcas]
4 Hb_003599_020 0.2550959314 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
5 Hb_001817_130 0.2569535216 - - PREDICTED: poly [ADP-ribose] polymerase 1 isoform X3 [Cucumis melo]
6 Hb_032202_050 0.2619894877 transcription factor TF Family: TCP conserved hypothetical protein [Ricinus communis]
7 Hb_065755_020 0.2696706166 - - choline monooxygenase, putative [Ricinus communis]
8 Hb_000563_510 0.272583026 - - epoxide hydrolase, putative [Ricinus communis]
9 Hb_009710_020 0.2740970076 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
10 Hb_002235_180 0.2761604042 transcription factor TF Family: ERF PREDICTED: uncharacterized protein LOC105133481 [Populus euphratica]
11 Hb_161549_010 0.2764598799 - - conserved hypothetical protein [Ricinus communis]
12 Hb_029689_010 0.277620839 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
13 Hb_006694_030 0.2782294714 - - -
14 Hb_024105_010 0.2782583893 - - CCHC-type integrase [Theobroma cacao]
15 Hb_005941_020 0.280146956 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
16 Hb_000649_300 0.2803065185 transcription factor TF Family: Tify JAZ9 [Hevea brasiliensis]
17 Hb_074184_010 0.2810648221 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
18 Hb_000836_580 0.2812548338 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003581_270 0.2819565031 - - PREDICTED: protein kinase APK1A, chloroplastic-like isoform X1 [Citrus sinensis]
20 Hb_071072_010 0.2821146651 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]

Gene co-expression network

sample Hb_000803_250 Hb_000803_250 Hb_078954_010 Hb_078954_010 Hb_000803_250--Hb_078954_010 Hb_025964_040 Hb_025964_040 Hb_000803_250--Hb_025964_040 Hb_003599_020 Hb_003599_020 Hb_000803_250--Hb_003599_020 Hb_001817_130 Hb_001817_130 Hb_000803_250--Hb_001817_130 Hb_032202_050 Hb_032202_050 Hb_000803_250--Hb_032202_050 Hb_065755_020 Hb_065755_020 Hb_000803_250--Hb_065755_020 Hb_078954_010--Hb_065755_020 Hb_095471_020 Hb_095471_020 Hb_078954_010--Hb_095471_020 Hb_002897_010 Hb_002897_010 Hb_078954_010--Hb_002897_010 Hb_011671_280 Hb_011671_280 Hb_078954_010--Hb_011671_280 Hb_000809_140 Hb_000809_140 Hb_078954_010--Hb_000809_140 Hb_003747_050 Hb_003747_050 Hb_078954_010--Hb_003747_050 Hb_000242_030 Hb_000242_030 Hb_025964_040--Hb_000242_030 Hb_007777_010 Hb_007777_010 Hb_025964_040--Hb_007777_010 Hb_001114_020 Hb_001114_020 Hb_025964_040--Hb_001114_020 Hb_087587_010 Hb_087587_010 Hb_025964_040--Hb_087587_010 Hb_000045_160 Hb_000045_160 Hb_025964_040--Hb_000045_160 Hb_000631_090 Hb_000631_090 Hb_025964_040--Hb_000631_090 Hb_095694_010 Hb_095694_010 Hb_003599_020--Hb_095694_010 Hb_029576_010 Hb_029576_010 Hb_003599_020--Hb_029576_010 Hb_000318_410 Hb_000318_410 Hb_003599_020--Hb_000318_410 Hb_011381_070 Hb_011381_070 Hb_003599_020--Hb_011381_070 Hb_001158_120 Hb_001158_120 Hb_003599_020--Hb_001158_120 Hb_132840_020 Hb_132840_020 Hb_003599_020--Hb_132840_020 Hb_002471_020 Hb_002471_020 Hb_001817_130--Hb_002471_020 Hb_001817_130--Hb_001114_020 Hb_000165_120 Hb_000165_120 Hb_001817_130--Hb_000165_120 Hb_001817_130--Hb_087587_010 Hb_001091_030 Hb_001091_030 Hb_001817_130--Hb_001091_030 Hb_003914_030 Hb_003914_030 Hb_001817_130--Hb_003914_030 Hb_005394_010 Hb_005394_010 Hb_032202_050--Hb_005394_010 Hb_005496_160 Hb_005496_160 Hb_032202_050--Hb_005496_160 Hb_033930_010 Hb_033930_010 Hb_032202_050--Hb_033930_010 Hb_011671_110 Hb_011671_110 Hb_032202_050--Hb_011671_110 Hb_002609_190 Hb_002609_190 Hb_032202_050--Hb_002609_190 Hb_003216_050 Hb_003216_050 Hb_032202_050--Hb_003216_050 Hb_065755_020--Hb_095471_020 Hb_046109_010 Hb_046109_010 Hb_065755_020--Hb_046109_010 Hb_004667_040 Hb_004667_040 Hb_065755_020--Hb_004667_040 Hb_065755_020--Hb_032202_050 Hb_002965_070 Hb_002965_070 Hb_065755_020--Hb_002965_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.156032 0.299811 0.270444 0.0422362 0 0.0659256
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0724813 0.0912776

CAGE analysis