Hb_000165_120

Information

Type -
Description -
Location Contig165: 106558-107571
Sequence    

Annotation

kegg
ID pop:POPTR_0010s19260g
description POPTRDRAFT_659469; hypothetical protein
nr
ID XP_012086889.1
description PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Jatropha curcas]
swissprot
ID O44997
description Death-associated protein kinase dapk-1 OS=Caenorhabditis elegans GN=dapk-1 PE=2 SV=2
trembl
ID A0A067LC06
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01218 PE=4 SV=1
Gene Ontology
ID GO:0005515
description serine threonine-protein phosphatase 6 regulatory ankyrin repeat subunit b-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15195: 105814-107332
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000165_120 0.0 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Jatropha curcas]
2 Hb_087587_010 0.107569567 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
3 Hb_002259_110 0.119387573 - - PREDICTED: uncharacterized protein LOC105630166 [Jatropha curcas]
4 Hb_001373_160 0.1348577053 - - hypothetical protein JCGZ_16907 [Jatropha curcas]
5 Hb_000165_110 0.1388945917 - - unknown [Medicago truncatula]
6 Hb_010346_020 0.1395212104 - - PREDICTED: protein SCAI homolog [Jatropha curcas]
7 Hb_002553_010 0.1407875419 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 2-like [Populus euphratica]
8 Hb_000106_020 0.1415643649 - - PREDICTED: protein TOPLESS isoform X1 [Jatropha curcas]
9 Hb_001114_020 0.1469613414 desease resistance Gene Name: LRR_4 Disease resistance protein RPM1, putative [Ricinus communis]
10 Hb_007777_010 0.1526643975 - - PREDICTED: UPF0187 protein At3g61320, chloroplastic [Tarenaya hassleriana]
11 Hb_009659_030 0.1531948999 - - PREDICTED: beta-galactosidase 17 [Jatropha curcas]
12 Hb_001817_130 0.1543607707 - - PREDICTED: poly [ADP-ribose] polymerase 1 isoform X3 [Cucumis melo]
13 Hb_033554_020 0.1571825268 transcription factor TF Family: BES1 PREDICTED: beta-amylase 8 [Jatropha curcas]
14 Hb_010287_030 0.1578147682 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007982_050 0.1581021056 - - PREDICTED: somatic embryogenesis receptor kinase 2-like [Jatropha curcas]
16 Hb_000362_090 0.1596408048 - - PREDICTED: uncharacterized protein LOC105635736 isoform X1 [Jatropha curcas]
17 Hb_002025_270 0.1598833881 - - PREDICTED: uncharacterized protein At4g15970 isoform X1 [Jatropha curcas]
18 Hb_152910_010 0.1607995238 - - PREDICTED: uncharacterized protein LOC105632212 [Jatropha curcas]
19 Hb_004800_130 0.1611389318 - - hypothetical protein POPTR_0005s12580g [Populus trichocarpa]
20 Hb_001375_040 0.1628818001 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]

Gene co-expression network

sample Hb_000165_120 Hb_000165_120 Hb_087587_010 Hb_087587_010 Hb_000165_120--Hb_087587_010 Hb_002259_110 Hb_002259_110 Hb_000165_120--Hb_002259_110 Hb_001373_160 Hb_001373_160 Hb_000165_120--Hb_001373_160 Hb_000165_110 Hb_000165_110 Hb_000165_120--Hb_000165_110 Hb_010346_020 Hb_010346_020 Hb_000165_120--Hb_010346_020 Hb_002553_010 Hb_002553_010 Hb_000165_120--Hb_002553_010 Hb_002740_040 Hb_002740_040 Hb_087587_010--Hb_002740_040 Hb_000917_100 Hb_000917_100 Hb_087587_010--Hb_000917_100 Hb_087587_010--Hb_010346_020 Hb_087587_010--Hb_002259_110 Hb_004837_050 Hb_004837_050 Hb_087587_010--Hb_004837_050 Hb_002259_110--Hb_002553_010 Hb_152910_010 Hb_152910_010 Hb_002259_110--Hb_152910_010 Hb_001133_090 Hb_001133_090 Hb_002259_110--Hb_001133_090 Hb_075203_010 Hb_075203_010 Hb_002259_110--Hb_075203_010 Hb_000134_250 Hb_000134_250 Hb_002259_110--Hb_000134_250 Hb_002259_110--Hb_001373_160 Hb_033554_020 Hb_033554_020 Hb_001373_160--Hb_033554_020 Hb_001373_160--Hb_000134_250 Hb_012940_040 Hb_012940_040 Hb_001373_160--Hb_012940_040 Hb_004724_370 Hb_004724_370 Hb_001373_160--Hb_004724_370 Hb_001171_030 Hb_001171_030 Hb_001373_160--Hb_001171_030 Hb_010287_030 Hb_010287_030 Hb_001373_160--Hb_010287_030 Hb_005568_090 Hb_005568_090 Hb_000165_110--Hb_005568_090 Hb_001114_020 Hb_001114_020 Hb_000165_110--Hb_001114_020 Hb_004525_070 Hb_004525_070 Hb_000165_110--Hb_004525_070 Hb_000058_050 Hb_000058_050 Hb_000165_110--Hb_000058_050 Hb_002291_060 Hb_002291_060 Hb_000165_110--Hb_002291_060 Hb_096819_010 Hb_096819_010 Hb_010346_020--Hb_096819_010 Hb_000345_490 Hb_000345_490 Hb_010346_020--Hb_000345_490 Hb_000988_030 Hb_000988_030 Hb_010346_020--Hb_000988_030 Hb_010346_020--Hb_002259_110 Hb_001484_100 Hb_001484_100 Hb_010346_020--Hb_001484_100 Hb_010346_020--Hb_010287_030 Hb_004800_130 Hb_004800_130 Hb_002553_010--Hb_004800_130 Hb_002553_010--Hb_152910_010 Hb_001205_180 Hb_001205_180 Hb_002553_010--Hb_001205_180 Hb_001488_210 Hb_001488_210 Hb_002553_010--Hb_001488_210 Hb_000856_300 Hb_000856_300 Hb_002553_010--Hb_000856_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.7978 12.9085 12.5851 6.41873 6.28396 5.72027
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.796923 0.470089 0.360854 9.98451 3.69011

CAGE analysis