Hb_003599_020

Information

Type -
Description -
Location Contig3599: 13453-16310
Sequence    

Annotation

kegg
ID rcu:RCOM_1035000
description receptor protein kinase, putative (EC:2.7.11.30 1.3.1.74)
nr
ID XP_012067859.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID A0A067KYY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15779 PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003599_020 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
2 Hb_095694_010 0.1372346934 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Populus euphratica]
3 Hb_029576_010 0.158396224 - - PREDICTED: B-cell receptor-associated protein 31-like [Glycine max]
4 Hb_000318_410 0.1708646729 - - PREDICTED: extra-large guanine nucleotide-binding protein 1-like [Jatropha curcas]
5 Hb_011381_070 0.1806869536 transcription factor TF Family: DBB PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Jatropha curcas]
6 Hb_001158_120 0.1865073867 - - PREDICTED: uncharacterized protein LOC105648761 isoform X1 [Jatropha curcas]
7 Hb_132840_020 0.1881123906 - - PREDICTED: protein LHY [Jatropha curcas]
8 Hb_000622_210 0.1909904587 transcription factor TF Family: bZIP PREDICTED: common plant regulatory factor 1-like isoform X3 [Jatropha curcas]
9 Hb_052434_010 0.1917266982 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Sesamum indicum]
10 Hb_033930_010 0.1933145051 - - PREDICTED: uncharacterized protein LOC105635519 [Jatropha curcas]
11 Hb_000366_050 0.1949716315 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
12 Hb_071072_010 0.1982716637 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
13 Hb_006040_070 0.1994154468 - - orf107b gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
14 Hb_014361_170 0.1995018632 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 37 [Jatropha curcas]
15 Hb_007218_060 0.2003616924 - - PREDICTED: polyadenylate-binding protein 6 isoform X1 [Jatropha curcas]
16 Hb_001623_410 0.2011054401 - - PREDICTED: beta-amylase 1, chloroplastic [Jatropha curcas]
17 Hb_002073_020 0.2021965306 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
18 Hb_005080_020 0.2039838322 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
19 Hb_032202_050 0.2046040778 transcription factor TF Family: TCP conserved hypothetical protein [Ricinus communis]
20 Hb_005539_100 0.2061844932 - - nucleoside transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_003599_020 Hb_003599_020 Hb_095694_010 Hb_095694_010 Hb_003599_020--Hb_095694_010 Hb_029576_010 Hb_029576_010 Hb_003599_020--Hb_029576_010 Hb_000318_410 Hb_000318_410 Hb_003599_020--Hb_000318_410 Hb_011381_070 Hb_011381_070 Hb_003599_020--Hb_011381_070 Hb_001158_120 Hb_001158_120 Hb_003599_020--Hb_001158_120 Hb_132840_020 Hb_132840_020 Hb_003599_020--Hb_132840_020 Hb_002482_030 Hb_002482_030 Hb_095694_010--Hb_002482_030 Hb_015807_080 Hb_015807_080 Hb_095694_010--Hb_015807_080 Hb_095694_010--Hb_000318_410 Hb_000035_060 Hb_000035_060 Hb_095694_010--Hb_000035_060 Hb_172676_010 Hb_172676_010 Hb_095694_010--Hb_172676_010 Hb_002375_060 Hb_002375_060 Hb_029576_010--Hb_002375_060 Hb_000329_790 Hb_000329_790 Hb_029576_010--Hb_000329_790 Hb_083493_010 Hb_083493_010 Hb_029576_010--Hb_083493_010 Hb_008021_010 Hb_008021_010 Hb_029576_010--Hb_008021_010 Hb_000366_050 Hb_000366_050 Hb_029576_010--Hb_000366_050 Hb_000753_140 Hb_000753_140 Hb_000318_410--Hb_000753_140 Hb_033930_010 Hb_033930_010 Hb_000318_410--Hb_033930_010 Hb_000318_410--Hb_132840_020 Hb_000622_210 Hb_000622_210 Hb_000318_410--Hb_000622_210 Hb_002639_130 Hb_002639_130 Hb_000318_410--Hb_002639_130 Hb_000086_640 Hb_000086_640 Hb_000318_410--Hb_000086_640 Hb_011381_070--Hb_000366_050 Hb_011381_070--Hb_001158_120 Hb_000035_490 Hb_000035_490 Hb_011381_070--Hb_000035_490 Hb_002609_290 Hb_002609_290 Hb_011381_070--Hb_002609_290 Hb_001294_040 Hb_001294_040 Hb_011381_070--Hb_001294_040 Hb_011381_070--Hb_132840_020 Hb_001158_120--Hb_000366_050 Hb_001158_120--Hb_001294_040 Hb_001158_120--Hb_002609_290 Hb_005539_100 Hb_005539_100 Hb_001158_120--Hb_005539_100 Hb_007483_080 Hb_007483_080 Hb_001158_120--Hb_007483_080 Hb_001294_050 Hb_001294_050 Hb_132840_020--Hb_001294_050 Hb_132840_020--Hb_000086_640 Hb_048476_040 Hb_048476_040 Hb_132840_020--Hb_048476_040 Hb_001627_010 Hb_001627_010 Hb_132840_020--Hb_001627_010 Hb_132840_020--Hb_000329_790
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.025994 0.338934 0.387255 0.0876174 0 0.0626118
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0133524 0.0254739 0.0848138 0.142028

CAGE analysis