Hb_000704_040

Information

Type -
Description -
Location Contig704: 97984-98313
Sequence    

Annotation

kegg
ID rcu:RCOM_1272560
description aquaporin sip2.1, putative
nr
ID XP_002523679.1
description aquaporin sip2.1, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SCG0
description Aquaporin sip2.1, putative OS=Ricinus communis GN=RCOM_1272560 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable aquaporin sip2-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54991: 79787-98506
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000704_040 0.0 - - aquaporin sip2.1, putative [Ricinus communis]
2 Hb_000928_190 0.11945947 - - PREDICTED: putative acyl-activating enzyme 19 isoform X1 [Jatropha curcas]
3 Hb_002344_100 0.1251976936 - - PREDICTED: cation/calcium exchanger 4-like [Jatropha curcas]
4 Hb_033152_070 0.1295331507 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
5 Hb_000243_350 0.1303674295 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Tarenaya hassleriana]
6 Hb_002325_070 0.1313481646 - - ATP binding protein, putative [Ricinus communis]
7 Hb_009898_040 0.1330789891 - - conserved hypothetical protein [Ricinus communis]
8 Hb_010042_020 0.133272905 - - UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis]
9 Hb_001481_150 0.1344868776 - - hypothetical protein POPTR_0001s15440g [Populus trichocarpa]
10 Hb_010883_190 0.1375978226 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000946_110 0.1380428674 - - GTP cyclohydrolase I, putative [Ricinus communis]
12 Hb_000107_110 0.1397306797 - - nucleic acid binding protein, putative [Ricinus communis]
13 Hb_010997_090 0.142520307 transcription factor TF Family: mTERF hypothetical protein PRUPE_ppa019510mg, partial [Prunus persica]
14 Hb_000800_090 0.1439237832 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Jatropha curcas]
15 Hb_003207_020 0.1443730374 - - PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Jatropha curcas]
16 Hb_000046_170 0.1444189913 - - PREDICTED: uncharacterized protein LOC105631841 isoform X1 [Jatropha curcas]
17 Hb_005701_120 0.144451929 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Cucumis sativus]
18 Hb_000359_090 0.1449548254 - - PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial-like [Malus domestica]
19 Hb_006469_070 0.1450017341 - - PREDICTED: F-box/kelch-repeat protein At1g22040 [Jatropha curcas]
20 Hb_088327_010 0.1467549162 - - PREDICTED: serine hydroxymethyltransferase 7 [Jatropha curcas]

Gene co-expression network

sample Hb_000704_040 Hb_000704_040 Hb_000928_190 Hb_000928_190 Hb_000704_040--Hb_000928_190 Hb_002344_100 Hb_002344_100 Hb_000704_040--Hb_002344_100 Hb_033152_070 Hb_033152_070 Hb_000704_040--Hb_033152_070 Hb_000243_350 Hb_000243_350 Hb_000704_040--Hb_000243_350 Hb_002325_070 Hb_002325_070 Hb_000704_040--Hb_002325_070 Hb_009898_040 Hb_009898_040 Hb_000704_040--Hb_009898_040 Hb_000928_190--Hb_033152_070 Hb_000258_240 Hb_000258_240 Hb_000928_190--Hb_000258_240 Hb_002781_030 Hb_002781_030 Hb_000928_190--Hb_002781_030 Hb_010042_020 Hb_010042_020 Hb_000928_190--Hb_010042_020 Hb_001481_150 Hb_001481_150 Hb_000928_190--Hb_001481_150 Hb_003988_050 Hb_003988_050 Hb_000928_190--Hb_003988_050 Hb_002344_100--Hb_002325_070 Hb_000679_230 Hb_000679_230 Hb_002344_100--Hb_000679_230 Hb_006469_070 Hb_006469_070 Hb_002344_100--Hb_006469_070 Hb_000413_020 Hb_000413_020 Hb_002344_100--Hb_000413_020 Hb_000984_310 Hb_000984_310 Hb_002344_100--Hb_000984_310 Hb_033152_070--Hb_010042_020 Hb_003207_020 Hb_003207_020 Hb_033152_070--Hb_003207_020 Hb_004525_040 Hb_004525_040 Hb_033152_070--Hb_004525_040 Hb_003052_180 Hb_003052_180 Hb_033152_070--Hb_003052_180 Hb_000402_130 Hb_000402_130 Hb_033152_070--Hb_000402_130 Hb_003305_040 Hb_003305_040 Hb_000243_350--Hb_003305_040 Hb_002110_100 Hb_002110_100 Hb_000243_350--Hb_002110_100 Hb_005701_120 Hb_005701_120 Hb_000243_350--Hb_005701_120 Hb_000197_020 Hb_000197_020 Hb_000243_350--Hb_000197_020 Hb_000252_100 Hb_000252_100 Hb_000243_350--Hb_000252_100 Hb_011606_020 Hb_011606_020 Hb_000243_350--Hb_011606_020 Hb_010883_190 Hb_010883_190 Hb_002325_070--Hb_010883_190 Hb_003911_020 Hb_003911_020 Hb_002325_070--Hb_003911_020 Hb_002639_020 Hb_002639_020 Hb_002325_070--Hb_002639_020 Hb_002325_070--Hb_000679_230 Hb_001946_310 Hb_001946_310 Hb_009898_040--Hb_001946_310 Hb_009898_040--Hb_000402_130 Hb_000889_010 Hb_000889_010 Hb_009898_040--Hb_000889_010 Hb_066842_010 Hb_066842_010 Hb_009898_040--Hb_066842_010 Hb_000025_190 Hb_000025_190 Hb_009898_040--Hb_000025_190 Hb_000975_350 Hb_000975_350 Hb_009898_040--Hb_000975_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.46437 11.0274 5.57714 31.8324 3.28133 7.09281
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.1048 6.79206 12.2073 10.7142 14.8393

CAGE analysis