Hb_066842_010

Information

Type -
Description -
Location Contig66842: 481-945
Sequence    

Annotation

kegg
ID rcu:RCOM_1748120
description 6-phosphogluconolactonase, putative (EC:3.1.1.31)
nr
ID XP_012072701.1
description PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Jatropha curcas]
swissprot
ID Q84WW2
description Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1
trembl
ID A0A067L110
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06435 PE=4 SV=1
Gene Ontology
ID GO:0005777
description probable 6-phosphogluconolactonase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53334: 591-947 , PASA_asmbl_53335: 987-1209
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_066842_010 0.0 - - PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Jatropha curcas]
2 Hb_002392_010 0.0799486605 - - PREDICTED: apurinic endonuclease-redox protein isoform X4 [Jatropha curcas]
3 Hb_001946_390 0.0820511329 - - PREDICTED: NADH-cytochrome b5 reductase-like protein [Jatropha curcas]
4 Hb_000590_120 0.0841988804 - - dehydroascorbate reductase, putative [Ricinus communis]
5 Hb_001269_190 0.0859904969 - - PREDICTED: Golgi SNAP receptor complex member 1-1 [Jatropha curcas]
6 Hb_000185_220 0.0860335426 - - PREDICTED: uncharacterized protein LOC105631115 [Jatropha curcas]
7 Hb_000136_100 0.0870685721 - - PREDICTED: syntaxin-61 [Jatropha curcas]
8 Hb_032920_070 0.0887055828 - - PREDICTED: zinc finger protein-like 1 homolog [Jatropha curcas]
9 Hb_000240_030 0.0887067 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000046_170 0.0924796567 - - PREDICTED: uncharacterized protein LOC105631841 isoform X1 [Jatropha curcas]
11 Hb_008103_050 0.093914047 - - hypothetical protein JCGZ_07422 [Jatropha curcas]
12 Hb_062537_010 0.0948001644 - - hypothetical protein JCGZ_13884 [Jatropha curcas]
13 Hb_010997_090 0.0948064899 transcription factor TF Family: mTERF hypothetical protein PRUPE_ppa019510mg, partial [Prunus persica]
14 Hb_000025_190 0.0948075623 - - 26S proteasome non-atpase regulatory subunit, putative [Ricinus communis]
15 Hb_001662_130 0.0949512169 - - PREDICTED: bifunctional nuclease 2 isoform X1 [Jatropha curcas]
16 Hb_010560_050 0.096835362 - - PREDICTED: acyl-protein thioesterase 1-like [Jatropha curcas]
17 Hb_002110_100 0.0975768927 - - PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic [Jatropha curcas]
18 Hb_180343_010 0.099453073 - - Biotin carboxyl carrier protein of acetyl-CoA carboxylase, putative [Ricinus communis]
19 Hb_008147_090 0.0999653774 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000115_150 0.099976225 - - PREDICTED: IST1 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_066842_010 Hb_066842_010 Hb_002392_010 Hb_002392_010 Hb_066842_010--Hb_002392_010 Hb_001946_390 Hb_001946_390 Hb_066842_010--Hb_001946_390 Hb_000590_120 Hb_000590_120 Hb_066842_010--Hb_000590_120 Hb_001269_190 Hb_001269_190 Hb_066842_010--Hb_001269_190 Hb_000185_220 Hb_000185_220 Hb_066842_010--Hb_000185_220 Hb_000136_100 Hb_000136_100 Hb_066842_010--Hb_000136_100 Hb_002392_010--Hb_001946_390 Hb_032920_070 Hb_032920_070 Hb_002392_010--Hb_032920_070 Hb_002110_100 Hb_002110_100 Hb_002392_010--Hb_002110_100 Hb_002392_010--Hb_000185_220 Hb_005601_040 Hb_005601_040 Hb_002392_010--Hb_005601_040 Hb_012733_040 Hb_012733_040 Hb_001946_390--Hb_012733_040 Hb_004452_120 Hb_004452_120 Hb_001946_390--Hb_004452_120 Hb_000174_260 Hb_000174_260 Hb_001946_390--Hb_000174_260 Hb_000721_030 Hb_000721_030 Hb_001946_390--Hb_000721_030 Hb_001662_130 Hb_001662_130 Hb_000590_120--Hb_001662_130 Hb_000240_030 Hb_000240_030 Hb_000590_120--Hb_000240_030 Hb_000590_120--Hb_001269_190 Hb_000590_120--Hb_002110_100 Hb_004951_060 Hb_004951_060 Hb_000590_120--Hb_004951_060 Hb_185255_010 Hb_185255_010 Hb_001269_190--Hb_185255_010 Hb_002995_050 Hb_002995_050 Hb_001269_190--Hb_002995_050 Hb_001489_110 Hb_001489_110 Hb_001269_190--Hb_001489_110 Hb_000179_270 Hb_000179_270 Hb_001269_190--Hb_000179_270 Hb_006683_070 Hb_006683_070 Hb_001269_190--Hb_006683_070 Hb_000087_070 Hb_000087_070 Hb_001269_190--Hb_000087_070 Hb_006059_010 Hb_006059_010 Hb_000185_220--Hb_006059_010 Hb_001195_400 Hb_001195_400 Hb_000185_220--Hb_001195_400 Hb_003206_110 Hb_003206_110 Hb_000185_220--Hb_003206_110 Hb_001080_300 Hb_001080_300 Hb_000185_220--Hb_001080_300 Hb_000309_050 Hb_000309_050 Hb_000185_220--Hb_000309_050 Hb_001975_150 Hb_001975_150 Hb_000185_220--Hb_001975_150 Hb_007894_010 Hb_007894_010 Hb_000136_100--Hb_007894_010 Hb_000060_050 Hb_000060_050 Hb_000136_100--Hb_000060_050 Hb_000258_240 Hb_000258_240 Hb_000136_100--Hb_000258_240 Hb_062537_010 Hb_062537_010 Hb_000136_100--Hb_062537_010 Hb_002150_040 Hb_002150_040 Hb_000136_100--Hb_002150_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.3631 17.1954 35.5856 76.1929 11.2775 26.2649
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
47.9113 36.5631 32.1684 45.2968 51.8624

CAGE analysis