Hb_000665_220

Information

Type -
Description -
Location Contig665: 211841-218313
Sequence    

Annotation

kegg
ID rcu:RCOM_0923440
description catalytic, putative (EC:2.4.1.224)
nr
ID XP_002515489.1
description catalytic, putative [Ricinus communis]
swissprot
ID Q9LFP3
description Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2
trembl
ID B9RP20
description Catalytic, putative OS=Ricinus communis GN=RCOM_0923440 PE=4 SV=1
Gene Ontology
ID GO:0050508
description probable glycosyltransferase at5g25310

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000665_220 0.0 - - catalytic, putative [Ricinus communis]
2 Hb_002151_010 0.2035550278 - - hypothetical protein POPTR_0006s14610g [Populus trichocarpa]
3 Hb_018133_100 0.207652728 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_001328_050 0.2216434302 - - PREDICTED: uncharacterized protein LOC105640854 [Jatropha curcas]
5 Hb_005656_070 0.2231927125 - - PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Jatropha curcas]
6 Hb_004738_030 0.2256744415 - - Inactive protein kinase [Gossypium arboreum]
7 Hb_133230_010 0.2316632267 - - hypothetical protein L484_001846 [Morus notabilis]
8 Hb_012586_050 0.2332935163 - - PREDICTED: triosephosphate isomerase, cytosolic [Prunus mume]
9 Hb_007765_070 0.2336527243 - - PREDICTED: mitochondrial uncoupling protein 2 [Jatropha curcas]
10 Hb_002307_080 0.24200966 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004225_140 0.2479589215 - - PREDICTED: probable receptor-like protein kinase At1g33260 [Jatropha curcas]
12 Hb_004907_090 0.2495663074 - - ATP binding protein, putative [Ricinus communis]
13 Hb_008511_060 0.2516931072 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [Jatropha curcas]
14 Hb_000589_060 0.2537533572 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00699 [Jatropha curcas]
15 Hb_004324_210 0.2556529459 - - RNA polymerase sigma factor rpoD, putative [Ricinus communis]
16 Hb_154114_030 0.2559171915 - - amino acid binding protein, putative [Ricinus communis]
17 Hb_182249_010 0.2574276969 - - -
18 Hb_002900_150 0.258253314 - - PREDICTED: syntaxin-81 [Jatropha curcas]
19 Hb_000631_090 0.2591024968 - - PREDICTED: uncharacterized protein LOC105640619 [Jatropha curcas]
20 Hb_004725_030 0.2594264266 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X4 [Jatropha curcas]

Gene co-expression network

sample Hb_000665_220 Hb_000665_220 Hb_002151_010 Hb_002151_010 Hb_000665_220--Hb_002151_010 Hb_018133_100 Hb_018133_100 Hb_000665_220--Hb_018133_100 Hb_001328_050 Hb_001328_050 Hb_000665_220--Hb_001328_050 Hb_005656_070 Hb_005656_070 Hb_000665_220--Hb_005656_070 Hb_004738_030 Hb_004738_030 Hb_000665_220--Hb_004738_030 Hb_133230_010 Hb_133230_010 Hb_000665_220--Hb_133230_010 Hb_004158_050 Hb_004158_050 Hb_002151_010--Hb_004158_050 Hb_000120_350 Hb_000120_350 Hb_002151_010--Hb_000120_350 Hb_002900_150 Hb_002900_150 Hb_002151_010--Hb_002900_150 Hb_004324_210 Hb_004324_210 Hb_002151_010--Hb_004324_210 Hb_004907_090 Hb_004907_090 Hb_002151_010--Hb_004907_090 Hb_000984_220 Hb_000984_220 Hb_002151_010--Hb_000984_220 Hb_119583_020 Hb_119583_020 Hb_018133_100--Hb_119583_020 Hb_002026_020 Hb_002026_020 Hb_018133_100--Hb_002026_020 Hb_018133_100--Hb_001328_050 Hb_018133_100--Hb_002151_010 Hb_018133_100--Hb_004324_210 Hb_000042_110 Hb_000042_110 Hb_018133_100--Hb_000042_110 Hb_001328_050--Hb_002026_020 Hb_001328_050--Hb_002900_150 Hb_000968_060 Hb_000968_060 Hb_001328_050--Hb_000968_060 Hb_000915_130 Hb_000915_130 Hb_001328_050--Hb_000915_130 Hb_003090_160 Hb_003090_160 Hb_001328_050--Hb_003090_160 Hb_002053_050 Hb_002053_050 Hb_005656_070--Hb_002053_050 Hb_005062_060 Hb_005062_060 Hb_005656_070--Hb_005062_060 Hb_005656_070--Hb_004907_090 Hb_007594_080 Hb_007594_080 Hb_005656_070--Hb_007594_080 Hb_022693_130 Hb_022693_130 Hb_005656_070--Hb_022693_130 Hb_005656_070--Hb_004158_050 Hb_002311_190 Hb_002311_190 Hb_004738_030--Hb_002311_190 Hb_009222_070 Hb_009222_070 Hb_004738_030--Hb_009222_070 Hb_001349_030 Hb_001349_030 Hb_004738_030--Hb_001349_030 Hb_004738_030--Hb_002053_050 Hb_000503_020 Hb_000503_020 Hb_004738_030--Hb_000503_020 Hb_000665_190 Hb_000665_190 Hb_004738_030--Hb_000665_190 Hb_000579_060 Hb_000579_060 Hb_133230_010--Hb_000579_060 Hb_000154_050 Hb_000154_050 Hb_133230_010--Hb_000154_050 Hb_006588_160 Hb_006588_160 Hb_133230_010--Hb_006588_160 Hb_000818_100 Hb_000818_100 Hb_133230_010--Hb_000818_100 Hb_133230_010--Hb_002311_190 Hb_133230_010--Hb_000503_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.03015 0.0504128 0.171107 0.122764 0.0608529 0.109959
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0127011 0.0242531 0 0.0540929

CAGE analysis