Hb_000579_060

Information

Type -
Description -
Location Contig579: 106974-108870
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa005118mg
description hypothetical protein
nr
ID XP_012071931.1
description PREDICTED: uncharacterized protein LOC105633849 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KU97
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04483 PE=4 SV=1
Gene Ontology
ID GO:0016757
description udp-glycosyltransferase superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49769: 106910-121825 , PASA_asmbl_49770: 106847-121825
cDNA
(Sanger)
(ID:Location)		 001_B22.ab1: 106910-108543

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000579_060 0.0 - - PREDICTED: uncharacterized protein LOC105633849 isoform X1 [Jatropha curcas]
2 Hb_003687_210 0.0892508313 - - PREDICTED: malate dehydrogenase [Populus euphratica]
3 Hb_006831_070 0.0936661371 - - PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Jatropha curcas]
4 Hb_000608_350 0.1057376328 - - PREDICTED: ER membrane protein complex subunit 10 [Jatropha curcas]
5 Hb_000056_160 0.1086451689 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Jatropha curcas]
6 Hb_000599_170 0.1087366688 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like isoform X2 [Populus euphratica]
7 Hb_000579_070 0.1102058297 - - hypothetical protein CISIN_1g0119542mg, partial [Citrus sinensis]
8 Hb_002805_060 0.1146161158 - - PREDICTED: signal peptide peptidase [Jatropha curcas]
9 Hb_003894_040 0.1153540181 - - nucleotide binding protein, putative [Ricinus communis]
10 Hb_133230_010 0.1203725726 - - hypothetical protein L484_001846 [Morus notabilis]
11 Hb_000640_070 0.128726691 - - PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Jatropha curcas]
12 Hb_015026_100 0.1304576907 - - PREDICTED: transmembrane protein 184C-like [Jatropha curcas]
13 Hb_073973_150 0.1311046113 - - PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
14 Hb_000630_030 0.1311503281 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2 isoform X1 [Populus euphratica]
15 Hb_008511_060 0.1316744568 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [Jatropha curcas]
16 Hb_003104_040 0.1338038482 - - PREDICTED: insulin-degrading enzyme isoform X1 [Jatropha curcas]
17 Hb_000154_050 0.135398158 - - CMP-sialic acid transporter, putative [Ricinus communis]
18 Hb_029866_100 0.1368734545 - - PREDICTED: probable beta-1,3-galactosyltransferase 11 [Jatropha curcas]
19 Hb_000261_210 0.138173746 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
20 Hb_003398_100 0.1388314583 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000579_060 Hb_000579_060 Hb_003687_210 Hb_003687_210 Hb_000579_060--Hb_003687_210 Hb_006831_070 Hb_006831_070 Hb_000579_060--Hb_006831_070 Hb_000608_350 Hb_000608_350 Hb_000579_060--Hb_000608_350 Hb_000056_160 Hb_000056_160 Hb_000579_060--Hb_000056_160 Hb_000599_170 Hb_000599_170 Hb_000579_060--Hb_000599_170 Hb_000579_070 Hb_000579_070 Hb_000579_060--Hb_000579_070 Hb_003687_210--Hb_000056_160 Hb_003687_210--Hb_000579_070 Hb_003104_040 Hb_003104_040 Hb_003687_210--Hb_003104_040 Hb_013726_080 Hb_013726_080 Hb_003687_210--Hb_013726_080 Hb_004096_060 Hb_004096_060 Hb_003687_210--Hb_004096_060 Hb_006831_070--Hb_000608_350 Hb_006831_070--Hb_000599_170 Hb_008511_060 Hb_008511_060 Hb_006831_070--Hb_008511_060 Hb_003894_040 Hb_003894_040 Hb_006831_070--Hb_003894_040 Hb_007380_140 Hb_007380_140 Hb_006831_070--Hb_007380_140 Hb_007800_020 Hb_007800_020 Hb_000608_350--Hb_007800_020 Hb_000637_140 Hb_000637_140 Hb_000608_350--Hb_000637_140 Hb_007163_060 Hb_007163_060 Hb_000608_350--Hb_007163_060 Hb_005322_050 Hb_005322_050 Hb_000608_350--Hb_005322_050 Hb_004223_110 Hb_004223_110 Hb_000608_350--Hb_004223_110 Hb_005723_020 Hb_005723_020 Hb_000608_350--Hb_005723_020 Hb_000056_160--Hb_000579_070 Hb_000261_210 Hb_000261_210 Hb_000056_160--Hb_000261_210 Hb_004064_040 Hb_004064_040 Hb_000056_160--Hb_004064_040 Hb_000154_050 Hb_000154_050 Hb_000056_160--Hb_000154_050 Hb_001002_060 Hb_001002_060 Hb_000056_160--Hb_001002_060 Hb_027380_030 Hb_027380_030 Hb_000599_170--Hb_027380_030 Hb_002805_060 Hb_002805_060 Hb_000599_170--Hb_002805_060 Hb_000599_170--Hb_003894_040 Hb_001051_090 Hb_001051_090 Hb_000599_170--Hb_001051_090 Hb_006915_020 Hb_006915_020 Hb_000599_170--Hb_006915_020 Hb_002092_100 Hb_002092_100 Hb_000599_170--Hb_002092_100 Hb_002749_080 Hb_002749_080 Hb_000579_070--Hb_002749_080 Hb_004586_150 Hb_004586_150 Hb_000579_070--Hb_004586_150 Hb_000579_070--Hb_000261_210 Hb_000787_060 Hb_000787_060 Hb_000579_070--Hb_000787_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.7774 8.86859 24.9211 22.4616 20.371 18.4157
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.19048 2.93499 3.70984 14.5595 9.48474

CAGE analysis