Hb_000613_070

Information

Type -
Description -
Location Contig613: 46601-49805
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000613_070 0.0 - - -
2 Hb_001999_210 0.071962658 - - PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Eucalyptus grandis]
3 Hb_000309_050 0.0905513797 - - PREDICTED: CASP-like protein 4A1 isoform X1 [Jatropha curcas]
4 Hb_002611_010 0.0915517793 - - amino acid transporter, putative [Ricinus communis]
5 Hb_001080_300 0.0964594519 - - PREDICTED: F-box protein SKIP17-like [Jatropha curcas]
6 Hb_000803_320 0.0977736135 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
7 Hb_003106_190 0.1010396651 - - Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis]
8 Hb_132880_040 0.1035501058 - - PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 [Jatropha curcas]
9 Hb_138585_080 0.1040586952 - - PREDICTED: uncharacterized protein LOC105648741 [Jatropha curcas]
10 Hb_000684_210 0.1042840803 - - PREDICTED: uncharacterized protein LOC105642177 [Jatropha curcas]
11 Hb_000186_050 0.1061074703 - - PREDICTED: uncharacterized protein LOC105649281 [Jatropha curcas]
12 Hb_000504_180 0.1065134008 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
13 Hb_003206_110 0.1071658272 - - Putative 1-aminocyclopropane-1-carboxylate deaminase [Gossypium arboreum]
14 Hb_000046_170 0.1092536912 - - PREDICTED: uncharacterized protein LOC105631841 isoform X1 [Jatropha curcas]
15 Hb_000789_200 0.1093262507 - - mitochondrial processing peptidase alpha subunit, putative [Ricinus communis]
16 Hb_000270_390 0.1095430608 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
17 Hb_000525_090 0.1107007379 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
18 Hb_001662_100 0.1114975931 - - PREDICTED: serine/threonine-protein kinase EDR1-like [Jatropha curcas]
19 Hb_002768_060 0.1115703758 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X1 [Jatropha curcas]
20 Hb_004046_030 0.1119079069 - - PREDICTED: GPCR-type G protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000613_070 Hb_000613_070 Hb_001999_210 Hb_001999_210 Hb_000613_070--Hb_001999_210 Hb_000309_050 Hb_000309_050 Hb_000613_070--Hb_000309_050 Hb_002611_010 Hb_002611_010 Hb_000613_070--Hb_002611_010 Hb_001080_300 Hb_001080_300 Hb_000613_070--Hb_001080_300 Hb_000803_320 Hb_000803_320 Hb_000613_070--Hb_000803_320 Hb_003106_190 Hb_003106_190 Hb_000613_070--Hb_003106_190 Hb_005463_110 Hb_005463_110 Hb_001999_210--Hb_005463_110 Hb_000186_050 Hb_000186_050 Hb_001999_210--Hb_000186_050 Hb_000789_200 Hb_000789_200 Hb_001999_210--Hb_000789_200 Hb_003544_160 Hb_003544_160 Hb_001999_210--Hb_003544_160 Hb_002768_060 Hb_002768_060 Hb_001999_210--Hb_002768_060 Hb_000185_220 Hb_000185_220 Hb_000309_050--Hb_000185_220 Hb_003206_110 Hb_003206_110 Hb_000309_050--Hb_003206_110 Hb_004480_100 Hb_004480_100 Hb_000309_050--Hb_004480_100 Hb_001975_150 Hb_001975_150 Hb_000309_050--Hb_001975_150 Hb_000504_180 Hb_000504_180 Hb_000309_050--Hb_000504_180 Hb_000297_120 Hb_000297_120 Hb_000309_050--Hb_000297_120 Hb_003517_070 Hb_003517_070 Hb_002611_010--Hb_003517_070 Hb_002611_010--Hb_001080_300 Hb_138585_080 Hb_138585_080 Hb_002611_010--Hb_138585_080 Hb_009674_050 Hb_009674_050 Hb_002611_010--Hb_009674_050 Hb_030959_010 Hb_030959_010 Hb_002611_010--Hb_030959_010 Hb_004957_030 Hb_004957_030 Hb_001080_300--Hb_004957_030 Hb_001080_300--Hb_000185_220 Hb_001627_040 Hb_001627_040 Hb_001080_300--Hb_001627_040 Hb_000417_390 Hb_000417_390 Hb_001080_300--Hb_000417_390 Hb_001029_040 Hb_001029_040 Hb_001080_300--Hb_001029_040 Hb_001080_300--Hb_001975_150 Hb_002874_110 Hb_002874_110 Hb_000803_320--Hb_002874_110 Hb_000270_390 Hb_000270_390 Hb_000803_320--Hb_000270_390 Hb_009288_020 Hb_009288_020 Hb_000803_320--Hb_009288_020 Hb_000803_320--Hb_000504_180 Hb_009178_060 Hb_009178_060 Hb_000803_320--Hb_009178_060 Hb_006663_060 Hb_006663_060 Hb_000803_320--Hb_006663_060 Hb_002811_010 Hb_002811_010 Hb_003106_190--Hb_002811_010 Hb_000613_110 Hb_000613_110 Hb_003106_190--Hb_000613_110 Hb_000359_210 Hb_000359_210 Hb_003106_190--Hb_000359_210 Hb_003994_110 Hb_003994_110 Hb_003106_190--Hb_003994_110 Hb_000684_210 Hb_000684_210 Hb_003106_190--Hb_000684_210 Hb_000077_150 Hb_000077_150 Hb_003106_190--Hb_000077_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0917114 0.155279 0.0848467 0.334172 0.0812176 0.129169
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.194319 0.137613 0.116374 0.206581 0.389205

CAGE analysis