Hb_000245_170

Information

Type -
Description -
Location Contig245: 140842-141719
Sequence    

Annotation

kegg
ID rcu:RCOM_1491300
description ankyrin repeat-containing protein, putative
nr
ID XP_002515990.1
description ankyrin repeat-containing protein, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RQH1
description Ankyrin repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1491300 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000245_170 0.0 - - ankyrin repeat-containing protein, putative [Ricinus communis]
2 Hb_137222_030 0.1301908608 - - -
3 Hb_000076_090 0.2539225015 - - protein with unknown function [Ricinus communis]
4 Hb_001019_070 0.2853311906 - - hypothetical protein POPTR_0007s05770g [Populus trichocarpa]
5 Hb_004724_050 0.2888126425 transcription factor TF Family: bZIP conserved hypothetical protein [Ricinus communis]
6 Hb_000479_340 0.2902767459 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
7 Hb_008887_030 0.2908975503 - - PREDICTED: uncharacterized protein LOC105650448 [Jatropha curcas]
8 Hb_015026_030 0.2914621338 - - hypothetical protein POPTR_0011s04350g [Populus trichocarpa]
9 Hb_000260_240 0.2923195491 - - hypothetical protein JCGZ_00622 [Jatropha curcas]
10 Hb_003055_030 0.2955864299 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]
11 Hb_188739_010 0.2960213548 - - protein binding protein, putative [Ricinus communis]
12 Hb_002477_170 0.2965991057 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_005050_050 0.2971890183 - - PREDICTED: wall-associated receptor kinase 5-like [Glycine max]
14 Hb_000637_070 0.2981835105 - - PREDICTED: uncharacterized protein LOC105650668 [Jatropha curcas]
15 Hb_107078_010 0.2982265785 - - -
16 Hb_003349_020 0.3026411001 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like [Beta vulgaris subsp. vulgaris]
17 Hb_000803_250 0.3046416978 - - PREDICTED: uncharacterized protein LOC105648317 isoform X1 [Jatropha curcas]
18 Hb_000042_390 0.3053736868 - - PREDICTED: cyclin-dependent kinase inhibitor 7 [Jatropha curcas]
19 Hb_000563_510 0.3070058165 - - epoxide hydrolase, putative [Ricinus communis]
20 Hb_001975_050 0.3100720728 - - Tyrosine-specific transport protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000245_170 Hb_000245_170 Hb_137222_030 Hb_137222_030 Hb_000245_170--Hb_137222_030 Hb_000076_090 Hb_000076_090 Hb_000245_170--Hb_000076_090 Hb_001019_070 Hb_001019_070 Hb_000245_170--Hb_001019_070 Hb_004724_050 Hb_004724_050 Hb_000245_170--Hb_004724_050 Hb_000479_340 Hb_000479_340 Hb_000245_170--Hb_000479_340 Hb_008887_030 Hb_008887_030 Hb_000245_170--Hb_008887_030 Hb_137222_030--Hb_001019_070 Hb_000260_240 Hb_000260_240 Hb_137222_030--Hb_000260_240 Hb_137222_030--Hb_000076_090 Hb_002279_020 Hb_002279_020 Hb_137222_030--Hb_002279_020 Hb_000563_510 Hb_000563_510 Hb_137222_030--Hb_000563_510 Hb_002301_210 Hb_002301_210 Hb_000076_090--Hb_002301_210 Hb_000136_020 Hb_000136_020 Hb_000076_090--Hb_000136_020 Hb_107078_010 Hb_107078_010 Hb_000076_090--Hb_107078_010 Hb_001975_050 Hb_001975_050 Hb_000076_090--Hb_001975_050 Hb_001250_040 Hb_001250_040 Hb_000076_090--Hb_001250_040 Hb_000093_140 Hb_000093_140 Hb_000076_090--Hb_000093_140 Hb_001019_070--Hb_000260_240 Hb_004846_230 Hb_004846_230 Hb_001019_070--Hb_004846_230 Hb_003549_130 Hb_003549_130 Hb_001019_070--Hb_003549_130 Hb_021443_030 Hb_021443_030 Hb_001019_070--Hb_021443_030 Hb_006788_090 Hb_006788_090 Hb_001019_070--Hb_006788_090 Hb_008173_130 Hb_008173_130 Hb_001019_070--Hb_008173_130 Hb_001797_030 Hb_001797_030 Hb_004724_050--Hb_001797_030 Hb_000049_220 Hb_000049_220 Hb_004724_050--Hb_000049_220 Hb_003228_090 Hb_003228_090 Hb_004724_050--Hb_003228_090 Hb_134546_010 Hb_134546_010 Hb_004724_050--Hb_134546_010 Hb_000608_330 Hb_000608_330 Hb_004724_050--Hb_000608_330 Hb_065256_010 Hb_065256_010 Hb_000479_340--Hb_065256_010 Hb_005888_060 Hb_005888_060 Hb_000479_340--Hb_005888_060 Hb_005511_080 Hb_005511_080 Hb_000479_340--Hb_005511_080 Hb_023904_010 Hb_023904_010 Hb_000479_340--Hb_023904_010 Hb_000386_010 Hb_000386_010 Hb_000479_340--Hb_000386_010 Hb_002561_040 Hb_002561_040 Hb_000479_340--Hb_002561_040 Hb_001953_110 Hb_001953_110 Hb_008887_030--Hb_001953_110 Hb_001040_090 Hb_001040_090 Hb_008887_030--Hb_001040_090 Hb_131719_010 Hb_131719_010 Hb_008887_030--Hb_131719_010 Hb_033312_120 Hb_033312_120 Hb_008887_030--Hb_033312_120 Hb_008887_030--Hb_023904_010 Hb_185274_030 Hb_185274_030 Hb_008887_030--Hb_185274_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0674454 0.0909384 0.348289 0 0 0.029891
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0248598 0.121399

CAGE analysis