Hb_004724_050

Information

Type transcription factor
Description TF Family: bZIP
Location Contig4724: 46820-48332
Sequence    

Annotation

kegg
ID rcu:RCOM_1280780
description hypothetical protein
nr
ID XP_002523794.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8RYD6
description ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1
trembl
ID B9SCS5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1280780 PE=4 SV=1
Gene Ontology
ID GO:0005634
description abscisic acid-insensitive 5-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004724_050 0.0 transcription factor TF Family: bZIP conserved hypothetical protein [Ricinus communis]
2 Hb_001797_030 0.2586182077 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
3 Hb_000049_220 0.2710608195 - - ammonium transporter, putative [Ricinus communis]
4 Hb_003228_090 0.2740036614 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105637258 [Jatropha curcas]
5 Hb_000245_170 0.2888126425 - - ankyrin repeat-containing protein, putative [Ricinus communis]
6 Hb_134546_010 0.2922741285 - - PREDICTED: uncharacterized protein LOC105107372 [Populus euphratica]
7 Hb_000608_330 0.3016736756 - - Zeamatin precursor, putative [Ricinus communis]
8 Hb_002960_070 0.303224749 - - -
9 Hb_003055_030 0.3063258071 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]
10 Hb_185274_030 0.3073469935 - - hypothetical protein JCGZ_15170 [Jatropha curcas]
11 Hb_007761_040 0.3166019205 - - carbonyl reductase, putative [Ricinus communis]
12 Hb_140465_010 0.3176804466 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
13 Hb_000189_400 0.3255490675 - - hypothetical protein CathTA2_0066 [Caldalkalibacillus thermarum TA2.A1]
14 Hb_008887_030 0.3267410098 - - PREDICTED: uncharacterized protein LOC105650448 [Jatropha curcas]
15 Hb_015026_030 0.3290068301 - - hypothetical protein POPTR_0011s04350g [Populus trichocarpa]
16 Hb_001338_070 0.3320547285 - - ORF126 [Jatropha curcas]
17 Hb_011900_030 0.335303082 - - hypothetical protein JCGZ_13686 [Jatropha curcas]
18 Hb_031862_160 0.3391397953 - - unnamed protein product [Vitis vinifera]
19 Hb_156850_130 0.3392764883 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001386_150 0.3437808345 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_004724_050 Hb_004724_050 Hb_001797_030 Hb_001797_030 Hb_004724_050--Hb_001797_030 Hb_000049_220 Hb_000049_220 Hb_004724_050--Hb_000049_220 Hb_003228_090 Hb_003228_090 Hb_004724_050--Hb_003228_090 Hb_000245_170 Hb_000245_170 Hb_004724_050--Hb_000245_170 Hb_134546_010 Hb_134546_010 Hb_004724_050--Hb_134546_010 Hb_000608_330 Hb_000608_330 Hb_004724_050--Hb_000608_330 Hb_000497_240 Hb_000497_240 Hb_001797_030--Hb_000497_240 Hb_005694_100 Hb_005694_100 Hb_001797_030--Hb_005694_100 Hb_140465_010 Hb_140465_010 Hb_001797_030--Hb_140465_010 Hb_000803_160 Hb_000803_160 Hb_001797_030--Hb_000803_160 Hb_000668_100 Hb_000668_100 Hb_001797_030--Hb_000668_100 Hb_004143_030 Hb_004143_030 Hb_000049_220--Hb_004143_030 Hb_007504_030 Hb_007504_030 Hb_000049_220--Hb_007504_030 Hb_000049_220--Hb_134546_010 Hb_001257_150 Hb_001257_150 Hb_000049_220--Hb_001257_150 Hb_027380_240 Hb_027380_240 Hb_000049_220--Hb_027380_240 Hb_000189_400 Hb_000189_400 Hb_000049_220--Hb_000189_400 Hb_003228_090--Hb_000608_330 Hb_001390_080 Hb_001390_080 Hb_003228_090--Hb_001390_080 Hb_153636_010 Hb_153636_010 Hb_003228_090--Hb_153636_010 Hb_000628_010 Hb_000628_010 Hb_003228_090--Hb_000628_010 Hb_008643_050 Hb_008643_050 Hb_003228_090--Hb_008643_050 Hb_000627_010 Hb_000627_010 Hb_003228_090--Hb_000627_010 Hb_137222_030 Hb_137222_030 Hb_000245_170--Hb_137222_030 Hb_000076_090 Hb_000076_090 Hb_000245_170--Hb_000076_090 Hb_001019_070 Hb_001019_070 Hb_000245_170--Hb_001019_070 Hb_000479_340 Hb_000479_340 Hb_000245_170--Hb_000479_340 Hb_008887_030 Hb_008887_030 Hb_000245_170--Hb_008887_030 Hb_134546_010--Hb_000608_330 Hb_007242_030 Hb_007242_030 Hb_134546_010--Hb_007242_030 Hb_046615_030 Hb_046615_030 Hb_134546_010--Hb_046615_030 Hb_134546_010--Hb_000189_400 Hb_000165_170 Hb_000165_170 Hb_134546_010--Hb_000165_170 Hb_001089_010 Hb_001089_010 Hb_134546_010--Hb_001089_010 Hb_000608_330--Hb_001390_080 Hb_000608_330--Hb_000628_010 Hb_000608_330--Hb_008643_050 Hb_000115_040 Hb_000115_040 Hb_000608_330--Hb_000115_040 Hb_000608_330--Hb_000627_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.104339 0.0199003 0.2395 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.147193

CAGE analysis