Hb_007242_030

Information

Type -
Description -
Location Contig7242: 44982-46395
Sequence    

Annotation

kegg
ID eus:EUTSA_v10000698mg
description hypothetical protein
nr
ID XP_010525680.1
description PREDICTED: methylesterase 3-like isoform X2 [Tarenaya hassleriana]
swissprot
ID -
description -
trembl
ID K7L148
description Uncharacterized protein OS=Glycine max PE=4 SV=1
Gene Ontology
ID GO:0016829
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007242_030 0.0 - - PREDICTED: methylesterase 3-like isoform X2 [Tarenaya hassleriana]
2 Hb_000165_170 0.0827907735 transcription factor TF Family: G2-like hypothetical protein POPTR_0010s19310g [Populus trichocarpa]
3 Hb_001946_230 0.0843233614 - - -
4 Hb_000313_160 0.0843288571 - - BnaC02g20570D [Brassica napus]
5 Hb_000337_020 0.0846677005 transcription factor TF Family: MYB PREDICTED: myb-related protein 308 isoform X2 [Jatropha curcas]
6 Hb_061183_010 0.0847350339 - - PREDICTED: uncharacterized protein LOC105775353 [Gossypium raimondii]
7 Hb_001281_030 0.0848578743 - - hypothetical protein POPTR_0010s18450g [Populus trichocarpa]
8 Hb_003685_020 0.0862313871 - - PREDICTED: laccase-14-like [Fragaria vesca subsp. vesca]
9 Hb_034168_020 0.0868993525 - - putative uncharacterized protein (mitochondrion) [Hevea brasiliensis]
10 Hb_118410_020 0.0882393961 - - PREDICTED: UDP-glycosyltransferase 76C4 [Vitis vinifera]
11 Hb_003020_320 0.0940850556 - - -
12 Hb_000039_140 0.0983093415 - - nuclease, putative [Ricinus communis]
13 Hb_099335_030 0.1000173175 - - hypothetical protein M569_10107, partial [Genlisea aurea]
14 Hb_007317_040 0.1008431932 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Jatropha curcas]
15 Hb_000140_020 0.101020114 - - BnaA02g09930D [Brassica napus]
16 Hb_002056_040 0.1012775452 - - arsenical pump-driving atpase, putative [Ricinus communis]
17 Hb_001736_010 0.1036200251 - - ring finger protein, putative [Ricinus communis]
18 Hb_000185_110 0.1048005599 - - hypothetical protein JCGZ_11437 [Jatropha curcas]
19 Hb_029552_010 0.106439155 - - hypothetical protein JCGZ_08684 [Jatropha curcas]
20 Hb_003598_060 0.1070454331 - - hypothetical protein POPTR_0006s25370g [Populus trichocarpa]

Gene co-expression network

sample Hb_007242_030 Hb_007242_030 Hb_000165_170 Hb_000165_170 Hb_007242_030--Hb_000165_170 Hb_001946_230 Hb_001946_230 Hb_007242_030--Hb_001946_230 Hb_000313_160 Hb_000313_160 Hb_007242_030--Hb_000313_160 Hb_000337_020 Hb_000337_020 Hb_007242_030--Hb_000337_020 Hb_061183_010 Hb_061183_010 Hb_007242_030--Hb_061183_010 Hb_001281_030 Hb_001281_030 Hb_007242_030--Hb_001281_030 Hb_001736_010 Hb_001736_010 Hb_000165_170--Hb_001736_010 Hb_001823_010 Hb_001823_010 Hb_000165_170--Hb_001823_010 Hb_003921_010 Hb_003921_010 Hb_000165_170--Hb_003921_010 Hb_000003_490 Hb_000003_490 Hb_000165_170--Hb_000003_490 Hb_005245_110 Hb_005245_110 Hb_000165_170--Hb_005245_110 Hb_001946_230--Hb_000313_160 Hb_001946_230--Hb_061183_010 Hb_001946_230--Hb_000337_020 Hb_001946_230--Hb_001281_030 Hb_003685_020 Hb_003685_020 Hb_001946_230--Hb_003685_020 Hb_034168_020 Hb_034168_020 Hb_001946_230--Hb_034168_020 Hb_000313_160--Hb_000337_020 Hb_000313_160--Hb_001281_030 Hb_000313_160--Hb_061183_010 Hb_000313_160--Hb_003685_020 Hb_000313_160--Hb_034168_020 Hb_000337_020--Hb_001281_030 Hb_000337_020--Hb_003685_020 Hb_000337_020--Hb_034168_020 Hb_000337_020--Hb_061183_010 Hb_061183_010--Hb_001281_030 Hb_061183_010--Hb_003685_020 Hb_061183_010--Hb_034168_020 Hb_001281_030--Hb_003685_020 Hb_001281_030--Hb_034168_020 Hb_118410_020 Hb_118410_020 Hb_001281_030--Hb_118410_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.908637 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0332291 1.40705

CAGE analysis