Hb_118410_020

Information

Type -
Description -
Location Contig118410: 3786-5593
Sequence    

Annotation

kegg
ID vvi:100254809
description UDP-glycosyltransferase 76C4
nr
ID XP_002281324.1
description PREDICTED: UDP-glycosyltransferase 76C4 [Vitis vinifera]
swissprot
ID Q9M052
description UDP-glycosyltransferase 76F1 OS=Arabidopsis thaliana GN=UGT76F1 PE=2 SV=1
trembl
ID F6HNQ9
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g02810 PE=4 SV=1
Gene Ontology
ID GO:0016740
description udp-glycosyltransferase 76f1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_118410_020 0.0 - - PREDICTED: UDP-glycosyltransferase 76C4 [Vitis vinifera]
2 Hb_034168_020 0.0050089272 - - putative uncharacterized protein (mitochondrion) [Hevea brasiliensis]
3 Hb_003685_020 0.0079788641 - - PREDICTED: laccase-14-like [Fragaria vesca subsp. vesca]
4 Hb_001281_030 0.0165195747 - - hypothetical protein POPTR_0010s18450g [Populus trichocarpa]
5 Hb_000337_020 0.0183970121 transcription factor TF Family: MYB PREDICTED: myb-related protein 308 isoform X2 [Jatropha curcas]
6 Hb_000039_140 0.0246366311 - - nuclease, putative [Ricinus communis]
7 Hb_000313_160 0.0247856464 - - BnaC02g20570D [Brassica napus]
8 Hb_001946_230 0.0269997901 - - -
9 Hb_007317_040 0.0294241159 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Jatropha curcas]
10 Hb_061183_010 0.0345207589 - - PREDICTED: uncharacterized protein LOC105775353 [Gossypium raimondii]
11 Hb_000185_110 0.036377966 - - hypothetical protein JCGZ_11437 [Jatropha curcas]
12 Hb_029552_010 0.0391116591 - - hypothetical protein JCGZ_08684 [Jatropha curcas]
13 Hb_019449_010 0.0502956822 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_000192_100 0.0507308006 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
15 Hb_054127_030 0.0567942869 - - PREDICTED: putative L-type lectin-domain containing receptor kinase II.2 [Jatropha curcas]
16 Hb_081843_010 0.057903108 - - PREDICTED: uncharacterized protein LOC104880938 [Vitis vinifera]
17 Hb_001736_010 0.0591683194 - - ring finger protein, putative [Ricinus communis]
18 Hb_009026_010 0.0613751474 - - Squalene monooxygenase, putative [Ricinus communis]
19 Hb_052135_050 0.0620490813 - - PREDICTED: probable pectinesterase 67 [Jatropha curcas]
20 Hb_000028_290 0.0653102584 - - hypothetical protein JCGZ_25310 [Jatropha curcas]

Gene co-expression network

sample Hb_118410_020 Hb_118410_020 Hb_034168_020 Hb_034168_020 Hb_118410_020--Hb_034168_020 Hb_003685_020 Hb_003685_020 Hb_118410_020--Hb_003685_020 Hb_001281_030 Hb_001281_030 Hb_118410_020--Hb_001281_030 Hb_000337_020 Hb_000337_020 Hb_118410_020--Hb_000337_020 Hb_000039_140 Hb_000039_140 Hb_118410_020--Hb_000039_140 Hb_000313_160 Hb_000313_160 Hb_118410_020--Hb_000313_160 Hb_034168_020--Hb_003685_020 Hb_034168_020--Hb_001281_030 Hb_034168_020--Hb_000337_020 Hb_034168_020--Hb_000313_160 Hb_001946_230 Hb_001946_230 Hb_034168_020--Hb_001946_230 Hb_003685_020--Hb_001281_030 Hb_003685_020--Hb_000337_020 Hb_003685_020--Hb_000313_160 Hb_003685_020--Hb_001946_230 Hb_001281_030--Hb_000337_020 Hb_001281_030--Hb_000313_160 Hb_001281_030--Hb_001946_230 Hb_000337_020--Hb_000313_160 Hb_000337_020--Hb_001946_230 Hb_061183_010 Hb_061183_010 Hb_000337_020--Hb_061183_010 Hb_007317_040 Hb_007317_040 Hb_000039_140--Hb_007317_040 Hb_000185_110 Hb_000185_110 Hb_000039_140--Hb_000185_110 Hb_029552_010 Hb_029552_010 Hb_000039_140--Hb_029552_010 Hb_019449_010 Hb_019449_010 Hb_000039_140--Hb_019449_010 Hb_000192_100 Hb_000192_100 Hb_000039_140--Hb_000192_100 Hb_000313_160--Hb_001946_230 Hb_000313_160--Hb_061183_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.179852 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.31617

CAGE analysis