Hb_153636_010

Information

Type -
Description -
Location Contig153636: 48-668
Sequence    

Annotation

kegg
ID pop:POPTR_0017s09800g
description hypothetical protein
nr
ID XP_012076104.1
description PREDICTED: receptor-like protein kinase [Jatropha curcas]
swissprot
ID -
description -
trembl
ID M1DR77
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400042649 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153636_010 0.0 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
2 Hb_003228_090 0.1600599945 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105637258 [Jatropha curcas]
3 Hb_008643_050 0.2166370938 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
4 Hb_001390_080 0.2168767509 - - structural constituent of cell wall, putative [Ricinus communis]
5 Hb_000628_010 0.2202228917 - - PREDICTED: uncharacterized protein LOC105795966 [Gossypium raimondii]
6 Hb_008408_050 0.2207603531 - - -
7 Hb_016354_010 0.2340210934 - - -
8 Hb_079902_030 0.2355040465 - - conserved hypothetical protein [Ricinus communis]
9 Hb_012235_010 0.2356551266 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
10 Hb_002042_240 0.2408044502 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
11 Hb_002850_030 0.2482536725 - - -
12 Hb_001579_210 0.2523494427 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000608_330 0.2561701995 - - Zeamatin precursor, putative [Ricinus communis]
14 Hb_000059_120 0.2568837444 - - JHL22C18.10 [Jatropha curcas]
15 Hb_081703_020 0.2820305428 - - -
16 Hb_003417_070 0.303667367 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
17 Hb_012807_090 0.3039264182 - - PREDICTED: uncharacterized protein LOC100267173 [Vitis vinifera]
18 Hb_004951_050 0.3087126463 - - conserved hypothetical protein [Ricinus communis]
19 Hb_038508_010 0.3108938506 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
20 Hb_014929_010 0.3110807173 - - -

Gene co-expression network

sample Hb_153636_010 Hb_153636_010 Hb_003228_090 Hb_003228_090 Hb_153636_010--Hb_003228_090 Hb_008643_050 Hb_008643_050 Hb_153636_010--Hb_008643_050 Hb_001390_080 Hb_001390_080 Hb_153636_010--Hb_001390_080 Hb_000628_010 Hb_000628_010 Hb_153636_010--Hb_000628_010 Hb_008408_050 Hb_008408_050 Hb_153636_010--Hb_008408_050 Hb_016354_010 Hb_016354_010 Hb_153636_010--Hb_016354_010 Hb_000608_330 Hb_000608_330 Hb_003228_090--Hb_000608_330 Hb_003228_090--Hb_001390_080 Hb_003228_090--Hb_000628_010 Hb_003228_090--Hb_008643_050 Hb_000627_010 Hb_000627_010 Hb_003228_090--Hb_000627_010 Hb_008643_050--Hb_000628_010 Hb_008643_050--Hb_001390_080 Hb_008643_050--Hb_000627_010 Hb_008643_050--Hb_000608_330 Hb_000115_040 Hb_000115_040 Hb_008643_050--Hb_000115_040 Hb_001390_080--Hb_000628_010 Hb_001390_080--Hb_000608_330 Hb_001390_080--Hb_000627_010 Hb_001390_080--Hb_000115_040 Hb_000628_010--Hb_000627_010 Hb_000628_010--Hb_000608_330 Hb_000628_010--Hb_000115_040 Hb_001579_210 Hb_001579_210 Hb_008408_050--Hb_001579_210 Hb_008408_050--Hb_003228_090 Hb_075722_010 Hb_075722_010 Hb_008408_050--Hb_075722_010 Hb_003417_070 Hb_003417_070 Hb_008408_050--Hb_003417_070 Hb_012090_020 Hb_012090_020 Hb_008408_050--Hb_012090_020 Hb_079902_030 Hb_079902_030 Hb_016354_010--Hb_079902_030 Hb_012235_010 Hb_012235_010 Hb_016354_010--Hb_012235_010 Hb_002042_240 Hb_002042_240 Hb_016354_010--Hb_002042_240 Hb_002850_030 Hb_002850_030 Hb_016354_010--Hb_002850_030 Hb_012807_090 Hb_012807_090 Hb_016354_010--Hb_012807_090 Hb_004951_050 Hb_004951_050 Hb_016354_010--Hb_004951_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.14519 0 0.0369839 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.169281

CAGE analysis